Ziziphus jujuba (Chinese jujube): 132799061
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Entry
132799061 CDS
T04794
Name
(RefSeq) nuclear pore complex protein NUP98B-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132799061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zju03019
]
132799061
03036 Chromosome and associated proteins [BR:
zju03036
]
132799061
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132799061
Chromosome and associated proteins [BR:
zju03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
132799061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
132799061
NCBI-ProteinID:
XP_060671031
LinkDB
All DBs
Position
2:join(28614933..28617012,28620604..28620722)
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AA seq
732 aa
AA seq
DB search
MFGFTNNPFFGQSSSSPFGSHSSNATANNGFGGQTGSSTIFGGNSSTGVFGVAQSSSSSS
SPAFGAHESTTPTTTTFGCSGGGQRGGGSRMTCYAPTTPEPDNGGAVALGMLVSISAMPV
YKHKSHEELRWDDYQLGDKGGAVPVVEKLESIPAMPFHKDKSHEELRWDNYQSRDKGADT
SSSRINFPSPTLTLGQTSTPSLFPNLNAPKQQSPGSFTTSLQFPPSTASPSSSSSFEQSV
ITPTPTPVQGSIPSFEFNSSIFNPSSTTSIGPRPLPLNAAQSSSSTTQSNFLSASSPTLA
GQTSSTLFSNLYSPKTQHGSFTNHSFTTSVEFPYSSSPSTSVSPSTFVSSSPTSLIVQSI
GPTTTSIFNPSTTSFGKTTSSFRPTTTSSFVPSKIFHSDYPSTGLVNMFWGTPSVSTNMF
SSTPSLSASSPSQSLIFGENNFEQLSATKSSAVIQPNPTPVATNPFGTLPAMPQMSINDH
GVQYGISSMPVLDKPAVAAPARISSSLTSQLHLSQRRTRWMPATKYHPKNDGRPKFPFFS
VIVDEETDYIPKELVICPRDNPRAFITCQLNSTFDKASPIKDATCTPMEENGNSFEAASA
IVVYEHGAADIDALMPKLRPGSDYYTEPGIQELATKETSGRGFCCHVKDFVIGRHGYGSI
KFLGETDVRRLDMESLVRFNNREVIVYMDDSFLWRSGLFNPQIPYGLLLAQVLLKIIFAI
RDRVVIIFLAWD
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttttacgaataaccctttttttgggcagtcatctagtagtccatttgggtcc
cactcgagcaatgctacagccaataatggttttggtggtcaaacaggcagttccaccata
ttcggtggtaattcatcaactggtgtttttggtgtagcccaatcttcatcttcttcttct
tcaccagcttttggagcccatgagtccacaacaccaacaacaacaacatttggttgttct
ggtggtggccaacgtggtgggggaagccgaatgacatgttatgcaccaacaacacctgaa
ccagataatggtggagcagtagcactaggaatgttagtgtcaatatcagccatgcctgtt
tataaacataaaagccatgaggagctgagatgggacgactatcagttgggagataaaggt
ggagcagtaccagtagtagaaaagttagagtcaataccagccatgccttttcataaagat
aaaagccacgaggagctgcgatgggataactatcagtcgcgagataaaggtgctgatact
tcgtcttctcggataaactttccttcaccaacattaacattgggtcaaacatcaactcca
tctctgtttcccaatttaaatgctccaaagcagcagtctccaggtagttttacaacttca
ctacaatttcctccctccactgcatctccatcatcatcatcatcatttgagcaatcagtg
attactcctactcctactccagttcaaggatcaatcccttcatttgaattcaattctagc
atcttcaacccctcctctacaacttcaattggaccacgtcccctcccactcaatgctgct
cagtcgtcttcatcgactacacagtcaaacttcctttcggcttcttcaccaacattagct
ggtcaaacatcttcaactctgttctctaatctatattctccaaaaactcaacatggtagt
tttacaaatcatagttttacaacttcagtagaatttccatacagttcgtctccatcaaca
tctgtttcaccatcgacatttgtttcatcaagcccaacgtcgttgattgtgcaatcaatt
ggaccaactacaactagtatcttcaatccctctacaacttcatttggaaaaactacctct
tcttttaggccaactacaacttcttcctttgtcccatcaaaaatattccacagtgactat
ccttctactggattggtaaacatgttctggggcactccatcagtaagtactaacatgttt
tcaagcactccatcactaagtgcttcttcaccctcccaatctctaatttttggtgagaat
aactttgaacaattgtctgccactaaaagctctgctgttatacagccaaacccaacacca
gttgcaacaaatccatttggcacactaccagcaatgcctcaaatgtcaattaatgatcat
ggagttcaatatggaatatctagcatgcctgtattagacaaacctgctgttgcagctcct
gctagaatatcatcatcattaacttctcaactacacttatcacaaaggcggaccaggtgg
atgcctgcaaccaaatatcatcctaagaatgatggtcgtccaaagtttccatttttcagt
gttattgttgatgaagaaacagactacataccaaaagaacttgtcatttgtccgagggat
aacccaagagcatttatcacttgtcagttgaattcgacttttgacaaggcatccccgata
aaggatgctacttgtacaccaatggaggagaatggaaatagttttgaagctgcttctgct
attgtggtgtatgagcatggtgctgcagatattgatgcattaatgccaaagctgcgacca
ggctctgactactatacagagccaggaatccaagaattggcaaccaaggaaaccagcggc
agaggattctgctgtcacgtcaaggattttgtgatcggacgacatggttatggtagcatc
aaattcttgggtgagacagatgtgagaaggcttgatatggagtcgctagttcggttcaac
aaccgggaggtgattgtttacatggacgattcgtttttgtggcgtagtgggcttttcaat
ccccaaataccatatggacttctgttagcacaagttttgttgaaaattatttttgctata
agagaccgtgtggtgattatctttcttgcttgggattga
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integrated database retrieval system
