Zea mays (maize): 100274011
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Entry
100274011 CDS
T01088
Name
(RefSeq) nuclear exosome regulator NRDE2 isoform X1
KO
K26109
nuclear exosome regulator NRDE2
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100274011
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100274011
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
TPR_19
Motif
Other DBs
NCBI-GeneID:
100274011
NCBI-ProteinID:
XP_008681519
UniProt:
A0A804PNU6
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Position
5:219563880..219575185
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AA seq
1152 aa
AA seq
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MEPSSPATTATFPAAVEEHETYPPMVSSSLFPLFPFAASTSSAPPAESQWLSNPSFSFDA
SSLNIPATTSSSLPSPQSHSSDEDTPLQAAPAKYELVPSSPSSDEERGSRRKRSGRRKRK
REKERYDGAATSRKAGIRAWAGLETKPAKDYYVDAKGDHDNLAFGSLYRMDVARYRSQNM
MEAFGLNHLRFGSSHIDLDSDLDGMDNKVRAGGRYYSAKNAVSERNKGFKHLKIFKGNTS
VMLAEDFVPFGTQSLPLKSTTVEQELEESWEDEILRRTREFNKMSRERPHDEKVWLAFAQ
FQDKVASTQPQKAARLQTTERKISILEKAVELNPDSEELLLCLLKSYGKRDNTETLLTKW
EQILTKHPDSSTLWKQYLLLCQGEFSRFKVSEIRKSYVYAVQALSAACTKLCRQDNKSMD
SKSSSLVQLEVGLVDIFVNLCRFEWQTGHRELATGLFQAQMEFSLFAPPLYLTTSSKQRL
FEHFWNSGGARIGEDGALGWSEWLAKDEESRQKLSMQENSQETETGGWSGWFDPSLGNTE
TNDLSNKSLEPSLTDGNDAEDLDAEDSPAQDDVESLLKKLGIDVDAESNSEVKDAETWNR
WASMELSRDNQQWMPLHENYVGSIHCGDAPSGEDNDQLSRVILFEDVTEFLFSLSSEEAR
FSLMCQFIDFYGGKISRWTSTNSPSWLDRILSLENITDDILEDLGAVSDVVNKNQSSYSC
KYKLESLLGSMCDLSQRPGLMKFLKNAILLLLGVFPRNHILEEAVLVTTQMFTPQENSSS
IQTNASRALAKSMLKKDRQDFLLCGIYGRTEAMNGNIEQARKIFDMALLSTEATSEDLRK
KVPILYLWYAEMEITVSASRNNSDSMHRAVYILSCLGSNLKYSPFVGPISRLQVLRARQG
FKEQIRSSRSAFSCGAINKESVALICSASLFESMTTGCYSGLEVIEETFPMTFSESNNLE
CEDLWVYYIKMLQKNLNQLNLSRVWPSISRGVHKYPYNPKSYSATLTLSYLYSVSNNLRL
TLDKCSQRDPSVITLLFALSFEWGKAGSDNRIHSLFERALADDKLQKSVLLWRCYLAYEA
EIVCNSSAARRVFFRAIHACPWSKRLWLDGFQKLGSVLTLKELSDLQEVMRDKELNIRTD
IYEILLEEETNT
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggaaccctcgtcgccggccaccacggccaccttccctgctgccgtagaagaacatgag
acgtaccctcccatggtgtcatcctctctattcccacttttccccttcgccgcctccacc
tcctctgctccccccgccgaatcccaatggctttcaaaccctagcttctccttcgatgcc
tcctccctgaacatcccggctaccacctcatcgtcgctcccgtcgccgcagagccactcg
tccgatgaggacacgccgctgcaggccgctcctgcgaaatacgagctggtgccttcttcg
ccgtcctccgacgaggagagggggtcgcggaggaagagaagtgggaggaggaaacggaag
cgcgagaaggagcgctatgatggggcagcgacatcgcggaaggctgggattcgtgcctgg
gctggattggagacgaagccagccaaggattactatgtcgacgcgaagggcgaccatgat
aacctggcttttggatccctctacagaatggatgttgcacgctacagatcccagaatatg
atggaggcatttggtttaaatcatctgaggtttggttcatcacatattgatttggattca
gacttggatggaatggataacaaagtaagagctggaggccgttactattctgcaaaaaat
gcagtttctgaaagaaataaaggtttcaaacatctgaaaatatttaagggaaacacctct
gtaatgctcgctgaagattttgtcccatttggtacacaatcacttcctttgaaaagcaca
actgtggaacaagagctagaggagtcttgggaagatgaaatacttcgccggactagggaa
ttcaataagatgtctcgtgaacgccctcacgatgaaaaagtttggctggctttcgctcaa
tttcaggacaaagttgctagcactcagccacaaaaggctgctcgtttacaaactaccgaa
aggaaaattagcatattggagaaagctgtggagctcaatccagatagtgaggaattattg
ctttgccttctgaagtcatatggcaagagggacaacactgagactctattgactaaatgg
gagcaaatacttacgaagcacccagatagctctacgttgtggaaacagtatctgcttctg
tgccaaggggaattctccagattcaaagtttctgaaattcggaagtcctacgtgtatgct
gtacaggctctatctgcagcttgcaccaagttatgtaggcaggataataaaagcatggat
tccaaatcttcatccttagttcaactagaagtggggttggtggatatatttgttaatctg
tgccgatttgagtggcagacaggacatcgggaactagcaactgggctatttcaggcgcag
atggagtttagcttatttgcccctcctttgtatctgacaacaagcagtaagcaaaggctc
tttgaacacttctggaacagtggtggtgccagaattggggaagatggagctcttggatgg
tctgaatggttagcaaaagacgaggagagtagacaaaagttgtctatgcaagaaaattca
caagagactgaaacaggaggctggagtggttggtttgatccttctctgggtaatactgag
acaaatgatttatcaaacaaatcactggaaccatcattgaccgatggaaatgatgctgaa
gaccttgatgctgaggactcaccagcacaagatgatgttgaatccttgctgaaaaagctt
ggtatcgatgtagatgcagagtccaatagtgaagttaaagacgcagaaacctggaataga
tgggcctcaatggagctgtcacgggacaatcagcaatggatgcctcttcatgaaaattat
gtaggatcaattcattgtggtgatgctccatctggggaagacaatgaccagctttccaga
gtaattttgtttgaggatgtaactgagttcttgttttctctatcttcagaggaggcccgc
ttttctctgatgtgccaatttattgatttttatggtggcaaaatctcaagatggacatca
acaaacagtccaagttggctcgatcgaatattgagcttagagaatattacagatgacatc
ctggaagatctaggtgctgtatctgacgttgtaaacaagaaccaaagttcatatagttgt
aaatataaattggaatcattactgggaagcatgtgtgacctttcacaaaggccgggcctg
atgaaatttctcaaaaatgcgatactgcttctgcttggtgttttccctcgtaatcatatc
ctggaggaagctgttcttgttactacccaaatgtttactcctcaagagaactcttcctcc
attcaaactaatgcatcacgggctttggccaaaagtatgttgaagaaagaccgacaggat
tttttgctttgtgggatatatggacgaactgaggcaatgaatgggaacattgaacaagca
aggaagatatttgacatggcactgttatcaactgaagcaacttctgaggatcttaggaag
aaggttcccatcctttatctttggtacgccgagatggagattacagtgtccgcttcaaga
aacaactctgactcaatgcatcgtgcagtttacatcctatcctgcttagggagcaatcta
aaatattctccttttgttggccctatttcaaggcttcaggtcttgagggctcgccaaggg
tttaaagagcagattagaagctcacgatctgcattttcctgtggtgctataaacaaagaa
tcagttgctctgatctgctcagcttctttgttcgaaagcatgacaacaggctgttactcg
ggtcttgaagtgatagaggagacttttccaatgacattttcagagagcaataatttggag
tgtgaggatttgtgggtgtactacatcaaaatgcttcaaaaaaatcttaaccaattgaat
ctatcaagggtctggccaagcatatcacgcggagtgcacaaatatccctacaatccaaaa
tcatattcagcgacgttaaccctgagttatctttacagtgtatccaacaatctccgtctc
acactcgacaaatgtagtcaaagggacccttctgtaatcaccttgctctttgctttgtcc
tttgaatggggtaaagctggatctgacaatagaatacacagcctgtttgagagagctcta
gctgatgataagttgcagaagtctgtcctattgtggcgctgttatctagcctatgaggca
gaaatagtctgcaactcttctgcagcacggcgtgtgttcttcagagctatacatgcctgt
ccatggtctaaaagattatggcttgatggtttccaaaagttgggctctgttctgacattg
aaggagttgtcagatctccaggaagtgatgcgtgacaaggaattaaacatccgcactgac
atctatgagatactcctagaagaagaaacaaatacatga
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integrated database retrieval system
