Zea mays (maize): 100304231
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Entry
100304231 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100304231
KO
K12824
transcription elongation regulator 1
Organism
zma
Zea mays (maize)
Pathway
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100304231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
100304231
Spliceosome [BR:
zma03041
]
Complex A
U1 snRNP components
U1 related factors
100304231
Complex B
100304231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
100304231
NCBI-ProteinID:
NP_001334055
UniProt:
C0HDX2
A0A1D6GP79
C4J842
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All DBs
Position
5:28038055..28053050
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AA seq
1103 aa
AA seq
DB search
MATLASAVSDVGVEEPSPAKAADPKEPAAAVEEPAAAAAELAGASIPSPVAAADAGDASS
GPALATTPPASPATSAAPPPVSPAPLVSPAPPAEPGPPRSQFAGSLSYIAPGTPSPSAAF
SYNVLPRAPPAPQVGGAAASLQPCSSPALMVAPIPASALQPPAPGQYFGNRPSFSYNVVS
HANARLPTGQQFQPVTGANLAGPISRFVPPGSLQPPTPGHITRPSTAFPGSMAPNPPGSI
QLPFSVPRPSNIPFGAIAQQGSSDINNLKSDSPRAPEVTPQAMQLSTGMPSKSPSTIASA
SGSPSIPIQTLTNSSVPPRPEVFGATRPSVPAQPSATVSNPTGFLGRPIVPPAAPLPQTP
PPIATQGGTPQNSQRPFYPSYPSGPGIVPPQPLWPHPHPPQPTGFQQPPFQYYPAGPVGS
LGRPITGASAATMAFANVQPPGVSTGGDRKVQASTNAGSEQSTHAAAEPDSTGHGGQVTE
QLEDNRNTGVQDSDAWSAHKTETGVVYYYNALTGESTYQKPTGYKGELEKVATEPVPVSW
DKLAGTNWSIVTTSDGKKYYYDNKQKVSSWQLPPEVCEILKNAESGSLKEGSTSLQDAAT
IENKGVISIDASTPAIQTGGRDSLPLRQTVAPASPSPLDLIKKKLQDAGASSAPSALATS
SATSELNGSKPADAALKGQLVANNGEKLKDNNGDVNISDSSSDSDDEEHGPSKEDCIRQF
KVMLKERGVAPFSKWEKELPKIVFDPRFKAIPSHSTRRAIFDHYVRTRAEEERKEKRAAL
KAAVEAYKELLEEASEDINQKTDYQEFKRKWGADTRFEALDRKEREILFSEKVKAVQEKV
QSMRKAVIANFKSMLRESKDITSTSRWAKVKENFRSDPRYKAMKHEERETIFNEYIVELK
SAEQEAEQAAKAKVDEQAKLKERERETRKRKEREEQEMERVKMKIRRKEAVSSYQALLVE
MIKDPKASWTESKPKLEKDPQGRARNPDLGQGDAEKLFRDHVKDLYERCVRDFRALLSEV
ITPEVAARTTAEGKTAINSWSEAKGHLRSDLRYNKLPSKDKESIWRRYADDLTRKLRQSD
TKEKDKSDTDGKQPRSSDPPRRR
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctggcgtcggccgtctccgacgtgggcgtcgaagaaccctctccagcaaag
gcagctgacccgaaggaaccagcggccgccgtggaggaaccagcggccgccgcggcggaa
ttggcaggggcatccattccatctcccgtcgcggccgcagacgctggagatgcctcttcc
ggtcccgcgcttgccaccactcctcccgcttcacctgccacgtccgcagcgcctcctccc
gtttctcccgccccgctagtttctcctgccccgcccgcagagccagggccgccgcggtcg
caatttgcaggctccctatcctacatagcgccagggacaccgtctccgtcggcagctttt
tcttataacgtactgccgagagcgccaccagcgccccaagttggcggcgctgcagcttca
ctacagccatgctcttctccggctcttatggttgctcctatacccgcgtcagctcttcag
ccaccagccccagggcaatattttgggaacagaccttctttctcatataacgtagtttcg
catgctaatgctagattgcctactggtcagcagtttcaaccggtcactggagcaaatctt
gctggtccaatttctagatttgttccaccaggttccttgcagcctcccacccctgggcac
ataactcgccctagtacagcgttcccaggatctatggcaccaaatcctcctggatctatt
cagttgccgttttcagtgccaagaccatccaatattccttttggtgctattgcacaacag
ggcagctcagacattaataatttgaaatcggactccccaagggcaccagaggttacaccc
caagccatgcagttatctactggcatgccatcaaaatctccttcaacaatcgcaagtgct
tctggaagtccttcaatccccatccagacactaacaaattcatcggtgccacctcgccct
gaggtatttggagccactagaccatctgtacctgcacaaccttctgcaactgtctctaat
ccaacaggtttccttgggaggcctatagttccacctgctgctcctttgccccaaacacca
ccaccaattgcaacccaaggtggcacaccacagaattctcaacgaccgttttacccgtcc
tatccttcaggacctggtattgtcccacctcaacctttatggccacaccctcatcctcca
caacctactggatttcagcagcctcccttccagtactatccagctggtcctgtaggctct
cttggcaggccaataactggggcttctgctgcaactatggcctttgccaatgtgcaacca
cctggcgtgtcaactggtggggataggaaagtacaagcatcaacaaatgcaggatctgaa
cagtccactcatgctgcagctgagccagattctacaggacatggaggtcaagtcactgag
cagctggaggacaatagaaatactggagttcaggattcagatgcatggtctgctcacaaa
actgaaactggtgttgtatattattacaatgctttgacaggagagtcgacttaccagaaa
ccaaccggttataagggggagcttgagaaggttgcaacagaaccagttccagtttcttgg
gataaattggctggtactaactggagcatagtaactacaagtgatggaaagaaatattat
tatgataacaaacaaaaggttagcagctggcaacttccgccagaggtgtgtgagatcctc
aagaatgcggaatctggttccttaaaagaaggttcaacttcactgcaggatgctgcaact
atagagaataagggagtaataagcattgatgcaagtactcctgccatacagacaggtggc
cgtgattcgttgccacttcggcaaacagttgcccctgcatcgccatctccattggattta
ataaagaagaaattgcaggatgctggtgcttccagtgcgccttcagctctggctacttca
tctgctacctctgaattgaatggatccaaaccagctgatgctgcacttaaggggcaacta
gtggcgaataatggtgagaaattaaaagataacaatggtgatgtgaatatctcagattct
tcttcagattcagatgatgaggaacatggaccaagtaaagaggactgcattcgtcagttt
aaggtgatgctaaaggaacgaggagttgcaccattttcgaagtgggagaaggaacttcca
aaaatagtttttgacccacgctttaaggctattcctagtcactcaacaaggcgggctata
tttgaccactatgttcgcacacgtgctgaagaggagcggaaagagaaaagagctgccctg
aaggctgcagtagaggcgtataaagaattacttgaagaagcatccgaggacatcaaccag
aaaacagactaccaagaattcaaaagaaaatggggtgctgatacaaggtttgaagccttg
gatcgaaaggaaagggagattctttttagtgagaaagtcaaggctgttcaagaaaaagtc
caatcaatgcgcaaagctgtcatagctaatttcaaatcaatgcttcgagaaagtaaagat
ataacttcaactagccgatgggcaaaagttaaagaaaatttccgtagtgatccaaggtac
aaagccatgaagcatgaagaaagggagactatatttaatgaatacatagtggaactaaaa
tctgctgaacaggaagcagagcaagctgccaaggccaaagtggatgagcaagccaagtta
aaggagagggaacgtgaaacacgtaaaaggaaagaaagagaggagcaggagatggaaaga
gtaaaaatgaagatacgtagaaaagaggctgtgtcatcataccaagctttacttgttgaa
atgattaaggatcccaaggcatcgtggactgaatccaaaccaaaacttgaaaaagatcca
caaggtcgtgctcgaaatcctgacttaggccaaggtgatgcagaaaagttgtttcgtgac
catgtcaaggacctatatgagcggtgtgtacgtgatttccgggcacttctatctgaggtt
atcactccagaggtagcagcacggacaacagctgaggggaagacggcaatcaactcctgg
agtgaggcaaaaggtcatctaagatctgatctaaggtacaataagctaccgagtaaagac
aaagagtctatttggcggcgctatgctgatgacttgacgaggaaactcagacaatcagac
acgaaggagaaggacaaatcggatacagatgggaaacaacctaggtcctctgatccacct
aggcggaggtag
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