Zea mays (maize): 100381988
Help
Entry
100381988 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100381988
KO
K18752
transportin-1
Organism
zma
Zea mays (maize)
Pathway
zma03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100381988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100381988
03009 Ribosome biogenesis [BR:
zma03009
]
100381988
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100381988
Ribosome biogenesis [BR:
zma03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
100381988
Pre-60S particles
100381988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
IBN_N
HEAT_2
PDS5
CLASP_N
CEP104-like_TOG
UME
UTP20_N
Xpo1
Htt_N-HEAT_1
Usg
Motif
Other DBs
NCBI-GeneID:
100381988
NCBI-ProteinID:
NP_001168229
UniProt:
C0P3E1
LinkDB
All DBs
Position
2:27434067..27452273
Genome browser
AA seq
891 aa
AA seq
DB search
MAAPAIWQPQEQGLHEICTLLEAHISPNSDQARIWQQLQHYSQFPDFNNYLTFILARGEG
KSIEVRQAAGLLLKNNLRTTFISMQPSSQHYVKSELLPCIGATNRAIRSTVGTVISVLFQ
IVRVAGWIELFQALHKCLESNDLDHMEGAMDAIYKICEDVPEELDVDVPGLSERPINVFM
PKILQFFQSPHASLRKLSLGCINQYIVVMPSALYMSMDQYIQGLFNLAKDPSADVRKLVC
SAWVQLIEVRPSILESHLKNVTELILQANKDPDDEVALEACEFWSAYCDVSMPPEGLREF
LPRLIPTLLSNMVYADDDESLDDAEEDESFPDRDQDLKPRFHASRLHGSQTGDDDDDDDA
VNVWNLRKCSAAGLDVLSNVFGDSILPTLMPLIEQNLARTDDNSWKERETAVLCLGAIAE
GCIGGLYPHLPQIVAFLIPLLDDKFPLIRSITCWTLSRYSKFIVQSLDHPNGREQFDKIL
MGLLRRILDTNKRVQEAACSAFATLEEEASEELVPHLEVILQHLMCAYGKYQRRNLRILY
DALGTLADAVGAELNQAKYLDIFMPPLITKWQQLSNSDKDLFPLLECFTSIAQALGPGFA
QFAEPVFQRCINLIQSQQLAKIDPTAAGAVYDREFIVCSLDLLSGLAEGLGAGIESLVAQ
SSLRDLLLQCCMDEAADVRQSALALLGDLSRVCPIHLHPRLQEFLTVAAKQLNPQSVKDA
VSVANNACWAIGELAIKIGKEIAPVVITVVSCLITILKSPEGLNKSLVENSAITLGRLSW
VCPDIVAPHMEHFMQAWCSALCTIRDDFEKEDAFHGLCAMVAANPTGAAGSLAYICQACA
SWTEIKSEGLHNEVCQILNGYKQLLGNNGGWEQCMAALKPDVVQKLARYGV
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccggcgatatggcagccacaggagcaggggctccacgagatctgcaccctc
ctggaggcgcacatctcccccaactccgaccaggcccgcatctggcagcagctccagcac
tacagccagttccccgacttcaataattacctaaccttcatcctggcccgcggagagggg
aaatcaattgaagttagacaggcagctggtctactactgaaaaacaatctgcgaacgact
ttcatctctatgcaaccttcgtcccagcattatgttaagtctgagctgttaccatgtata
ggggcaaccaatagggctattagatccacagttggaacagtgatcagtgtacttttccaa
attgtacgagtcgctggatggattgagttgtttcaggcactccataagtgtttggagagt
aatgacctggatcacatggaaggtgctatggatgcgatatacaagatctgtgaggatgtc
cctgaagagctcgatgttgatgttcctggtttgtctgaacgaccgatcaatgtgtttatg
ccaaaaatactgcagttcttccagtcaccacatgcaagtttgagaaaactatcgttgggt
tgtataaatcagtacatagtagtgatgccatcggcactctacatgtctatggatcagtat
attcagggattattcaaccttgcaaaggacccttcagcagatgttcggaaactggtttgt
tcagcctgggttcagctcattgaagttcgcccatctattttggagtcacatcttaaaaat
gttactgaattgattctgcaagctaataaagatccagatgatgaagtcgctctggaagct
tgcgagttctggtctgcatactgtgatgtgagcatgcctcctgaaggtttacgggagttc
ttgccacgcttaatcccgactttgttgtcgaacatggtatatgctgatgatgatgagtcc
cttgatgatgctgaggaagatgaatcctttccggacagggaccaggatttgaagccccgc
tttcatgcctctcgattgcatggatcacaaactggagatgatgatgatgatgatgatgct
gtaaatgtctggaacctgcggaagtgtagtgctgctgggttggatgttctctctaatgtg
tttggtgacagcatccttccaactttaatgccattgattgagcaaaacttggctcgaaca
gatgacaattcttggaaggagagggaaactgctgttttgtgtctaggcgctatagcagag
gggtgcattggtggtctatacccacaccttcctcagattgttgccttcctaatcccactt
cttgatgataaatttcctcttatacggagtattacgtgttggacgctctctcgatatagc
aaattcattgttcagagccttgatcatccaaatggacgtgaacaatttgataagattctc
atgggattgctaagaaggatattggatactaacaaaagagtgcaagaggctgcttgttca
gcgtttgcaactcttgaagaggaagcttctgaagaattagtaccccacttggaagtaatt
ttgcagcacctcatgtgtgcctatggaaaataccagagacgaaatcttcggatactctat
gatgcccttggtaccctggctgatgctgttggagcagaattaaatcaggcaaaatatcta
gatatatttatgccgcctttgatcacgaagtggcagcaactttccaattctgacaaagat
ctatttccactccttgaatgctttacatctattgcacaggcattgggaccaggatttgct
cagtttgcggaaccagtgtttcaaaggtgcatcaatcttatccaatcgcaacagttggca
aagattgatcctactgcagctggtgcggtgtatgatagagaattcattgtttgttcgttg
gacctactgtctggacttgcagaaggtcttggcgctggtattgaaagtcttgttgcacag
agcagtttgagagatctgcttttgcaatgctgcatggatgaagcagctgatgttcgacaa
agtgcccttgcccttcttggagacctttctagggtttgcccaatacatttgcatccacgt
cttcaagaatttcttactgttgcagcaaagcaactgaaccctcagtctgtgaaggatgcg
gtatcagtagctaacaatgcctgttgggctattggagaattagcaatcaagattggcaaa
gaaatagcacctgtggtgatcaccgttgtttcgtgcttgattaccatcctaaaatcccca
gagggtttgaacaagtcacttgttgaaaatagtgcgatcactcttgggaggcttagctgg
gtctgtccagacatcgtggcccctcatatggagcatttcatgcaagcatggtgcagtgcc
ttgtgcacgatcagagatgattttgagaaagaggacgcgtttcatggactgtgtgcaatg
gtggcagcaaaccctacaggagccgctggttcattagcttacatctgccaggcctgtgca
agttggactgagataaaaagcgaaggtcttcacaatgaggtgtgccagattctgaatggc
tacaagcagctgcttggaaacaacggtgggtgggaacaatgcatggccgccctgaaacca
gacgttgtgcagaaattagctagatacggagtatga
DBGET
integrated database retrieval system
