Zea mays (maize): 103648257
Help
Entry
103648257 CDS
T01088
Name
(RefSeq) pentatricopeptide repeat-containing protein At5g03800 isoform X2
Organism
zma
Zea mays (maize)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_1
DYW_deaminase
PPR_3
E_motif
Eplus_motif
Motif
Other DBs
NCBI-GeneID:
103648257
NCBI-ProteinID:
XP_020404327
LinkDB
All DBs
Position
2:239905490..239911517
Genome browser
AA seq
850 aa
AA seq
DB search
MNGHLHLIPSTPPRLHLTSLSPTFLSFPPAPCPHPPPHGPHPRLPLRSVAVAAAADPRAA
HAAAVKSGALGPSSDARTANAVMCAYLRVGRLGDARDVFDWMPARDAASYSALISGYARL
AGGSGSVTATVASAELLGRMRLADGLLPTEYTFVGLFTACARRGNPRLGTQVHALAAKSG
HSSLLLVANAILGMYVKCGRFGDAMRAFDGMDRRDVSSWNAVLAGLVELGRHDEAFEMFG
EMRASGNVRADRFSLSALLTAAGEGVGQLQGEAVHALSFKSGLETDLSVGNALIGFYAEH
GASVEDVVSVFQRMPVKDVISWTGLLNGYMEFGLVDMALDVFERMPQRNFVTYNAVLTGF
CRNKEGVRATFAKKAGLRGLGLFRQMVEDGLEISDVTVTGVLNACAIAADRKVSEQVHAF
VIKCGCVSSPWSDAALIDMCIKCGRSGDAHLLFEQWQHEESFHIAWNSLLLASVRGGEYE
KALSTFLQMFRSSGAEFIDEFMLTSVLGVCGSLGFAELGKQMHTFAAKSGLLSARGVGNA
IISMYGKCGELKDAISLFERMSCRDLVSWNAMITAHLLLHQGDDILKIWSEMERSMVRPD
SITFLLVISACSHTSSDSTDKCRKLFLSMPSTYGIEPAMEHYAAFVYVLGCWGRFDEAEQ
LIGGMPLQPGALVWRSLLDSCSKHSNMAVRRRAMKHLLALEPQDPSTYVLTSNLLSESAR
WRSSENTRLEMYEKGMRKIPARSWTFHGNMVHSFFARDKSHPQSRDIYAGLDVLILECIK
AGYEPDTTFVLHDVEEYQKRHFLMYHSMKLASMYGLLMAGPGQTIRVVKNIRMCGDCHSF
LEHASAATGA
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaatggccatctccatctcatcccctccacccctccccggctccacctcacctcactg
tcccctaccttcctctccttcccgcccgcgccgtgtcctcatccgcctccccatgggccc
catccccgcctacccctccgctcggtggccgtcgcggccgccgccgacccccgcgccgcg
cacgcggcggcagtcaagtccggcgcgctcggcccctcctcagacgcccgcactgccaac
gccgtcatgtgcgcgtaccttcgcgtgggccgcctgggcgacgcgcgggacgtgttcgac
tggatgcccgcgcgcgacgccgcctcctacagcgcgctcatctcgggctacgcgcgcctc
gctggtggctccggctccgtcacggccaccgtcgcctccgcggagcttcttggacgcatg
cgcctcgcggacgggctgctccccaccgagtacacctttgtgggcctcttcaccgcctgc
gcccgcaggggcaacccgcgcctcgggacacaggtgcacgccctcgccgccaagtccggc
cactcctcgttgctcctcgtggccaacgcgatcctcggcatgtacgtcaagtgcggccgc
ttcggggacgcgatgagggcgttcgatggcatggaccgccgtgacgtctcgtcgtggaac
gccgtcctggccgggctcgtcgagctggggcggcacgatgaggcgttcgagatgttcggc
gagatgcgggcgagcgggaacgtccgcgccgacaggttcagtctgtcagcgctcctcaca
gcagcaggcgagggggttgggcagctccaaggggaggcggtgcatgctctgtcgttcaag
tcggggctggagacggacctgagtgtgggcaacgcgctcatcgggttctacgcggagcat
ggtgcctctgttgaggacgtggtgagcgttttccagaggatgcccgtgaaggacgtgatt
tcgtggactggtttgctgaatgggtacatggagtttggtctcgttgacatggcactggat
gtgtttgagcggatgccgcagaggaacttcgttacatacaatgcggttctcactgggttt
tgtcggaacaaggaaggcgtgcgcgccacttttgccaagaaggcggggctccgagggctg
ggtttgtttaggcaaatggtggaggatgggctggagatctcagatgtcacggtgacaggc
gtgctgaatgcttgtgctattgctgcggataggaaggtgagcgagcaggttcatgcgttt
gtgatcaagtgtggatgtgtgtctagtccatggagtgatgctgcgttgattgacatgtgc
atcaaatgtggccgatctggagacgcgcatctgttatttgagcaatggcagcatgaggag
agctttcacattgcctggaattctctactgctggcaagtgtcagaggtggtgagtatgag
aaagcactttcgaccttccttcagatgtttagaagcagtggtgcagaattcattgatgag
ttcatgttgacttctgtccttggagtatgtggcagtctaggttttgctgaacttggaaaa
caaatgcatacttttgctgcaaaatccgggcttctgagcgctcgtggagttggtaacgca
attatcagtatgtacggcaagtgtggggagttgaaagatgcaatcagtttgtttgagcgg
atgagttgtcgagacttggtgtcatggaatgcaatgatcactgcccatcttcttcttcat
cagggggatgatatattgaagatatggtctgagatggagagatcaatggtcaggcctgat
tccattacctttcttctggtcatatctgcttgcagtcacacaagctcagactccacagac
aaatgcagaaaactctttctttctatgccaagcacatatggcattgaaccagccatggag
cactatgcagcctttgtttatgtccttggctgctggggccgttttgacgaggcagagcag
cttataggtggtatgccattgcagcctggtgcattagtttggcggtctttgctagacagc
tgcagcaagcactccaacatggctgtgcggaggcgggccatgaagcatctgctggcattg
gaaccacaagacccgtccacgtacgtgctgacttcaaacctactatctgaatcagcaagg
tggcgctcctctgagaacacaaggctagagatgtatgaaaagggtatgcgcaagatcccg
gccaggagctggacgtttcatggcaacatggtccactcatttttcgcacgggataaatca
cacccacagtccagggacatatacgctggcctggatgtgctaatcctcgagtgcatcaag
gccgggtacgagccagacaccacctttgttctgcacgacgtcgaggagtaccagaagagg
cacttcctgatgtaccacagcatgaagctagcatcaatgtacggtcttctgatggcaggc
cctgggcagacaatccgcgtcgtgaagaacatccgcatgtgtggggactgtcactctttc
ttggagcacgcctctgctgccaccggtgcctga
DBGET
integrated database retrieval system
