Zea mays (maize): 103649589
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Entry
103649589 CDS
T01088
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zma03041
]
103649589
Enzymes [BR:
zma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103649589
Spliceosome [BR:
zma03041
]
Complex C
Other components
Complex C specific factors
103649589
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
AAA_22
HA2_N
DEAD
AAA_30
AAA_19
AAA_29
AAA_7
Motif
Other DBs
NCBI-GeneID:
103649589
NCBI-ProteinID:
XP_008673553
UniProt:
A0A804MXZ6
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Position
3:complement(3754713..3770774)
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AA seq
699 aa
AA seq
DB search
MSRFWKPGSEKPSTLLVDDEEGGVVFLPSSSSVSSSGFGYASLERQRQRLPVYKYRKAIL
YLVERHATTIVVGETGSGKSTQIPQYLKEAGWADGGRLIGCTQPRRLAVQMVASRVAEEV
GVKLGEEVGYTIRFEDQTNPGMTMIKFLTDGVLIREMMEDPLLTKYSVIMVDEAHERSIS
TDMLLGLLKKIQRRRPELRLIISSATIEARSMSTFFNIRRKNSLLGSSDNLPSPEPAVLS
VEGKGYTVEIHYVEEPVSDYLQATVNTVLLIHEKEPPGDILVFLTGQDDIEAAVKLLNEE
IQHLGRHYLDLLILPLYSGLPRGDQDLIFAPTSKGKRKVVLSTNIAETSLTLEGVVYVVD
SGFSKQKCYNPISDIESLVVAPISKASARQRAGRAGRVRPGKCFRIYTEEYYLTEMQSEG
IPEMQRSNLVSCIIQLKALGIDNILGFDWPASPSPEAMIRALEVLFSLGILDEDAKLTVP
IGFQVAEIPLDPMISKMILSANDFGCSDEILTIASFLSVQSVWVSVRGVKKEFDEAKLRF
AAAEGDHVTFLNIYKGFHQSGKSSQWCYKNFLNYQALKKVVDIRGQLLRIVKSFGIQLKS
CDRDMQAVRKAIIAGSFTNACHLEEYSQNGMYKTIRTLQEVYIHPSSVLFRVNPKWVVYQ
SLVSTDKHYMRNVIAIEPSWLTEAAPHFYQFRAFNPAPH
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggttctggaagccagggtcggagaagccgagcaccctactcgtcgacgacgag
gagggcggagtcgtcttcctgccctcctccagctccgtctcctcctccggctttggttac
gcgagtctagagagacagcggcaacggctgccggtgtacaagtaccgcaaagccattctc
tacctggtggagcggcacgccaccaccattgtcgtcggcgagactggcagcggcaagtcc
acgcagatccctcagtaccttaaggaggctggttgggctgacggtggtcggcttatagga
tgcactcagcccagacgactggctgttcagatggttgcatcaagagtagctgaagaagta
ggtgtaaagcttggagaagaagttggttataccatccgattcgaagatcaaacaaacccg
ggtatgaccatgataaaatttctcacagatggggtattgattagagagatgatggaagat
cctcttcttaccaagtatagtgtaattatggtggatgaagctcatgaaaggtccatctca
accgacatgttgctgggtctcttaaaaaagattcaacgtcgtcggcccgagttacggctt
attatctcctctgcaacaattgaagcaagatcaatgtcaaccttcttcaacattaggcga
aagaattctttgcttgggtcttctgataatttgcccagcccagaacctgctgtactttct
gttgaaggtaaaggatacaccgtggaaatccattatgttgaagaacctgtctcagactac
ttacaggctactgtgaatactgtacttcttattcacgaaaaggaaccaccaggggatatc
ttggtattcttaactggtcaggatgacatagaagctgctgttaagttgttgaatgaagaa
attcagcaccttggaagacactatttggacttgctgattttgcccttgtactccggcctt
ccgcggggagatcaagatctcatttttgctcctacatcaaaagggaaaaggaaagttgtg
ttatcaaccaatattgctgagacatcgctgactctggagggtgtggtatatgttgttgat
agtggattttccaagcagaaatgttataatccgatttcggacatagagagtttagttgtc
gcaccaatatccaaggcatctgcaagacaacgagcaggcagagctggaagggtgcgacct
gggaagtgctttaggatctatacagaggaatattatcttactgaaatgcagtcagaagga
attccagaaatgcaaaggtccaacctggtctcctgcataatacagttaaaagccctaggc
atagacaacatcctgggctttgattggccagcttctccatctccagaggcaatgattcgg
gctcttgaagttctattctccctaggtatcctcgatgaagatgccaaattaacagtaccc
attggcttccaagttgctgagatccctctggaccccatgatttcgaaaatgatcttgtca
gcgaatgattttggatgctctgatgagatattgaccatagcatcatttctgtctgttcaa
tctgtatgggtttctgtgaggggagtgaagaaggaatttgatgaagcaaagcttcgattt
gctgctgctgagggagatcatgtaacattcctgaatatctacaaaggatttcaccagtct
ggaaaatctagccaatggtgttacaagaactttttgaattaccaagcactgaagaaagtt
gtcgacattaggggacaacttctcaggatagtgaagagttttggtatacaactgaaatca
tgtgacagagatatgcaggcagttagaaaggccattattgctggttcatttactaatgca
tgtcatctggaggaatacagccaaaacggaatgtataaaacaattaggacattacaagaa
gtttatattcatccatcttcagttctctttagggtcaatccaaagtgggttgtctaccag
tctctcgtctcaactgacaagcattatatgcggaacgttattgccattgagccatcatgg
cttacggaagctgcaccacatttttatcagttccgagcattcaatcctgctccccactaa
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