Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023: A265_01571
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Entry
A265_01571 CDS
T03385
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
zmc
Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023
Brite
KEGG Orthology (KO) [BR:
zmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zmc03032
]
A265_01571 (gyrB)
03400 DNA repair and recombination proteins [BR:
zmc03400
]
A265_01571 (gyrB)
Enzymes [BR:
zmc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
A265_01571 (gyrB)
DNA replication proteins [BR:
zmc03032
]
Prokaryotic type
DNA Topoisomerases
A265_01571 (gyrB)
DNA repair and recombination proteins [BR:
zmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A265_01571 (gyrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
AHJ73016
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Position
1776872..1779310
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AA seq
812 aa
AA seq
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MATSKQHDDYDAGSIKVLRGLDAVRKRPGMYIGDTDDGSGLHHMVFEVSDNAIDEALAGY
CDLVKIAIYDDGSVSVEDNGRGIPTGIHPEEGVSAAEVIMTQLHAGGKFDNNANSNAYKV
SGGLHGVGVSVVNALSDYLELTVWRDGQEHRMRFEHGVAVEPLQVVGASDKRGTRVRFHP
SAETFKITEFNFEKLEHRYRELAFLNSGVRLQLTDKRTDPEKTVELFYEGGIAAFVKWLD
RAKTALIPEPVAIHGDRDDVMIDVALEWNDSYYEQVLCFTNNIPQRDGGTHLAAFRAALT
RTLNNYADKSGLLKKEKVQLTGDDMREGLTAIISVKLPDPKFSSQTKDKLVSSEVRQPLE
SLMADKMAEWLEENPAHAKVIIQKIIDAAAAREAAKRARELTRRKGVMDIASLPGKLADC
QERDPTKSEIFIVEGDSAGGSAKQGRNRHNQAILPLKGKILNTERSRLDRMLSSKEVGTL
IQALGTGIRDEFNIAKLRYHKIVIMTDADVDGAHIRTLLLTFFYRHMPEIIENGHLYIAQ
PPLFKVAKNRSEVYLKDEAALDNYLMDAGVASMMLHTDNGDRSGNDLHQMVEHARRTRLL
MNYVPNRYYAPLIETAALAGAFQSDIADEKRQDILKQVAEILTRSDSESDARWSVEFIPE
GFLFRRLWRGVTDAHTLDWNFIQSSEAAKLHQLAQEQAESYISAHPARLVTLAAQMDEEA
GQDIYRPSQLFEAILAVGSKGLSISRYKGLGEMNPEQLWETTLDPANRSMLKVEVEQADV
ADEIFSRLMGDVVEPRRDFIQQNALSVANLDV
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcaaaacagcatgacgattatgatgcaggatctatcaaggttctgcggggg
ctggatgccgttcgcaaacggcctggtatgtatattggtgatacggatgacggatcgggt
ctgcaccatatggtgttcgaagtttccgataacgccattgacgaagccttggccggttac
tgcgatctggtaaaaatcgcgatttatgacgatggttcggtctcggttgaagataacgga
cgcggtattccaaccggtattcatcccgaagaaggcgtttcggcagctgaagtcatcatg
acccagcttcacgccggtggtaaattcgataataacgcgaatagtaacgcttataaggtc
tccggcggtttacacggggtgggcgtttccgtagtaaacgcgcttagtgattatcttgaa
ttgaccgtttggcgcgatggacaagaacaccggatgcgtttcgagcatggtgttgccgtt
gaaccgttacaggtcgtcggcgcttccgataaaagaggcacgcgggttcgcttccatcct
tctgccgaaaccttcaaaattaccgaattcaattttgaaaagctggaacatcgttaccgc
gaattggcctttttgaattccggtgttcggttgcaattaaccgacaagcgcaccgatcct
gaaaaaacggtcgaattattctatgaaggcggtatcgctgcttttgtgaaatggcttgat
cgggcaaaaacagcgttaattcccgaacctgtcgctattcatggcgaccgtgatgatgtg
atgattgatgtcgctctggaatggaacgacagctattatgaacaggttctttgctttacc
aacaacattccacagcgtgacggcggcacccatttggcagcattccgcgctgctttgacg
cgcaccttaaacaattatgccgataaatccggtcttttgaaaaaagaaaaagtccagctt
accggcgatgacatgcgggaagggctgactgcaatcatttcggtcaaactgccagacccg
aaattttctagccagaccaaagataaactggtttcttccgaggttcggcaacctctcgaa
agcctgatggccgataagatggcagaatggctggaagaaaatccggcacatgccaaggtc
attatccaaaaaatcatcgatgcggcggcggcacgtgaggctgccaagcgcgctcgtgaa
ttgacccgccgtaaaggcgtgatggatatcgcttccttaccggggaaattggcggattgt
caggaacgtgacccgaccaaatccgaaatcttcatcgttgagggggattccgcaggtggc
tccgccaagcaggggcgtaatcgtcataatcaggccattttgccgctcaaaggtaaaatc
ctgaataccgaacgctctcgccttgatcggatgctttcatcgaaagaagtcggcacgctt
attcaggcgctaggcaccggtatccgcgacgaatttaatattgcaaagctgcgttatcat
aaaatcgtcatcatgacggatgccgatgttgacggtgcgcatattagaacgttgcttttg
accttcttctatcgccacatgccagaaattatcgaaaacgggcatctttacattgcgcag
ccgcctttgtttaaagtggcgaaaaaccgttccgaggtctatctcaaggacgaagccgca
cttgataactatctgatggatgccggtgttgccagcatgatgctgcataccgataacggc
gatcgttccggtaacgatcttcatcagatggtagaacatgcccgccggacgcgacttctt
atgaattacgtcccgaaccgctattatgcgcctttgattgaaacagcggcgttggcaggg
gctttccaaagcgatatcgcggatgaaaaacgccaagatatcttgaaacaggtcgctgaa
attctgacccgttccgatagcgaaagcgatgcccgctggtcagttgaatttatccccgaa
ggcttcctgttccgacgcttatggcgtggggtcaccgatgcccatacattggattggaac
ttcattcagtcatcagaagccgctaagctgcatcaactggcacaggaacaggcagaaagc
tatatttctgcccatccggcacggttagtcactctggctgcacagatggatgaagaggct
ggtcaggatatctatcgtccttcacagctttttgaagccattctggcagtcggtagcaaa
ggcctttcgatttcccgctataaaggtttgggtgaaatgaaccccgaacagctttgggaa
accacgttagaccctgccaaccgttcgatgctgaaagtcgaagtggaacaggccgatgtc
gctgatgaaatcttctcgcgtttgatgggcgatgtggtggaaccacgccgtgacttcatt
cagcagaatgcgttatcagtcgccaatctcgacgtttaa
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