Zygotorulaspora mrakii: HG535_0F02950
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Entry
HG535_0F02950 CDS
T06976
Name
(RefSeq) uncharacterized protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
zmk
Zygotorulaspora mrakii
Pathway
zmk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HG535_0F02950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zmk03041
]
HG535_0F02950
Enzymes [BR:
zmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HG535_0F02950
Spliceosome [BR:
zmk03041
]
Complex C
Other components
Step II factors
HG535_0F02950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
nSTAND3
AAA_30
ABC_tran
AAA_19
NB-ARC
AAA_14
T2SSE
AAA_7
AAA_16
AAA
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
59237543
NCBI-ProteinID:
XP_037145510
LinkDB
All DBs
Position
6:577745..581167
Genome browser
AA seq
1140 aa
AA seq
DB search
MSHIDPELLRIIGTDDNTVLDFLSNIKKSSGDVNDFKERIDKLDVILTPEDAKTAYLLLP
VEKDSKEFDPRSEVSCLLKQSLGIDDYVVVDFILNKAKECKRSDKFAENLDELGCGINKE
LAEQIFSILGTSPGESTKAKSLQHMTVGESTAHGLTLPNKKIKWEELSDTKDLLPSDNLK
QQLLDPAPVMGKTYEGTVKNVASFGCFVQICGTEEKNCTGLVHISALSDTRVRNPNDIVQ
VGQKVFVKVVKLQMNGKVSLSMKNINQLTGEEEGSGANNTPIGIRGRSSKAQEVVTERRP
LTSPERWEIRQLIASGAASVEEYPELNHKSSDETNSYTDGQKEEGKDNSLMEDLEVELNL
DDEPKFLRGQLDNGPKKYEPPKIVRVPKGSMNRVAMNGSNLMKEHRENKMLRKKEIEQQI
RKKQAMGELGDNPEDRKVDLSDLRQQLVITAWERNRMREPIAFGRKTSMPISSQRKSLPV
YQMKDALMKAVRENQFLIIVGETGSGKTTQITQYLNDEGFSDGGIIGCTQPRRVAAVSVS
KRVAEEIGCKLGDEVGYTIRFEDMTSAKTRIKYMTDGMLQREALLDPTMSKYSVIMLDEA
HERTVATDVLFALLKQAAKKRPDLKVIVTSATLDSAKFSEYFCGCPVINIPGKTFPVEVL
YSQTPQMDYIESALDTVVEIHVNEGPGDILVFLTGQDEIDSCCEVLYQRVKTLGDSIGEL
LILPVYSALPSEIQSKIFEPTPEGSRKVVFATNIAETSITINGIYYVIDPGFAKVNTFNP
RVGMEQLVVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLPNTIPEIQRQNLSL
TILMLKAMGINDLIHFEFMDPPPKNLLMKALEELFNLQALDDDGLLTKLGMRMSQFPMEP
TLARALLASVTNNCSEDIIIVISMLSVQNVFYRPKGKEQEADNKKARFHHPYGDHLTLLN
VYKRWQQANCTEQFCTLNFLQSRHLKRARDVRNQLMAIFSRFKLPIVSCHGDPSIIRETL
VSGFFFNAAKRDSQVGYKTLTGGTAVGIHPSSSLYGKEYEYVMYHSLVLTSREYMSQVTA
IDPKWLIKAAPHFYKITDEESQSRKKAKIVPLHNRYSKDQNSWKLSSIRQSREKALGIKR
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatattgatcctgagcttcttcggattataggtactgatgacaacacagttttg
gactttctgtcgaacatcaagaaatcatcgggcgatgtgaacgattttaaggaacggatt
gataaactcgatgtgatcctaacgccggaagatgccaaaaccgcttatttattgcttcca
gttgaaaaagattcgaaggaatttgatcctcgtagtgaggtctcttgccttttaaaacaa
agtttgggcatagatgattatgttgttgtagattttatcctaaacaaggctaaagaatgc
aaaagatcagataaatttgctgagaatttagatgagctggggtgtggaatcaataaggaa
cttgctgagcaaatcttctctattttgggcacgtcaccaggtgaaagcacaaaggcaaag
tctttgcaacacatgacagttggtgaaagtacggcacatgggctcacgctcccaaacaag
aagataaaatgggaggaacttagtgacacgaaggaccttttaccctcagacaatttgaag
caacagcttttggatccggcacctgttatgggtaaaacatacgaaggtacagttaaaaat
gtagcttctttcggttgctttgttcagatatgtggcacagaggaaaaaaactgtacgggt
ctagttcatatatctgcgctatctgatacaagggtgagaaaccctaatgatattgtgcag
gtggggcagaaggtttttgtgaaagtagtaaagctccaaatgaacggtaaggtatcattg
agtatgaagaatattaaccaattaactggtgaagaagagggcagtggcgcgaataatact
cctattgggataagaggtagatcctccaaagctcaagaagtagttacggaaaggagaccc
ttgacgtctcctgaaaggtgggaaattagacaacttatagctagtggagctgcttcagta
gaagaatacccagaattgaatcataaatcaagtgatgaaaccaattcgtataccgatgga
caaaaagaagagggtaaagacaacagcttaatggaagatctcgaggttgaattgaattta
gatgatgagccgaaattcctgcggggacagctggataatggaccaaaaaagtatgaacct
ccaaaaatagtaagggtaccgaaaggctctatgaacagggtagccatgaacgggtccaat
cttatgaaggaacatagggaaaataagatgctaaggaaaaaggaaatcgagcagcaaata
aggaaaaaacaagctatgggagagctgggtgataatcctgaggataggaaagttgattta
tctgacctccgacagcaactagtcattacagcatgggaaaggaacagaatgagggaacca
atagcgtttggtaggaaaacttcaatgcctattagttcacaaagaaaatccctacctgta
taccagatgaaggacgcattaatgaaggccgttagagaaaaccaatttctcattatagtg
ggggagactggttcaggtaagactactcaaatcactcagtatctcaatgatgaaggcttc
agtgacggtggaataattggatgcacacaaccgcgtagggttgctgccgtatctgtatca
aaaagggtcgctgaggaaattggctgtaaattgggtgatgaggtcggatacactataagg
tttgaagatatgacgtctgcgaaaaccaggataaaatacatgacagatggtatgcttcaa
agagaggcgttactggatcccaccatgtcaaaatattcagtgattatgctggacgaagct
catgagaggacagtagcaacggatgttcttttcgcactgctcaaacaagcagctaaaaaa
aggcctgaccttaaagtgattgtaacgtctgctactctggattctgcaaaattctccgag
tacttttgcggctgtcctgtaatcaacattcccggtaaaacattccctgttgaagtatta
tactcgcaaacacctcaaatggactatatagagtccgctttggatactgttgttgaaatt
catgtaaatgaaggtcctggtgatattcttgtgtttctgacagggcaagatgaaattgat
tcatgctgtgaagtactatatcagagagtgaaaactttgggagatagcataggggaactc
ttgattttacccgtctattctgctttacccagtgaaatccagtctaaaatttttgagcct
accccagaaggctctagaaaggtcgtttttgcgaccaatatcgcagagacgtctattact
atcaatggtatttattacgtcattgatccaggttttgcaaaagtgaatacattcaatcca
agagtgggcatggagcaactagtcgtgtctccgatatcacaagcgcaagccaaccaaagg
aaaggtagggcaggcagaacaggacccggaaaatgttataggttgtatacggagtccgca
ttctacaacgaaatgttgccaaataccataccggaaattcaacgacaaaacttatcttta
accattttgatgcttaaagctatgggtattaacgacctgattcattttgaattcatggat
ccgccgcccaagaatcttttaatgaaagctctggaagaacttttcaacttgcaagctttg
gatgatgacggacttttgacaaagttaggaatgcgaatgtcccagtttccaatggagccg
acactagcaagggcacttctagcatcagtaacaaacaattgttctgaagatatcatcatt
gttatatcaatgctttctgtacaaaatgtattttacagaccaaagggtaaagagcaggaa
gcagataacaagaaggcaagatttcatcatccatatggtgatcatttaacactattgaat
gtgtataagcgctggcagcaagccaattgtaccgagcaattttgcactctgaatttttta
cagtccaggcatttgaaacgtgccagagatgtaaggaatcagttgatggcaatcttcagc
agatttaaactacccatagttagctgtcatggtgacccgagtataatccgagaaactctg
gtttccggttttttcttcaatgcggctaagagggactcccaggttggctataaaacgcta
acaggtgggacagcagtgggaatccatccttcaagttcgttatacggcaaagaatatgaa
tacgtgatgtatcacagtttagtgctgacgagtagagagtatatgtctcaagtcacagct
atcgatccaaagtggctgatcaaggcagcgccccatttctataaaatcactgatgaagag
agccaatcaagaaaaaaagccaagattgttccattgcataacaggtactcaaaggatcaa
aattcttggaaattgagttctattaggcaatctcgagagaaagcactgggaatcaaaagg
tag
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