KEGG   Zygosaccharomyces rouxii: ZYRO0F11572g
Entry
ZYRO0F11572g      CDS       T01118                                 
Name
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
zro  Zygosaccharomyces rouxii
Pathway
zro03030  DNA replication
zro03410  Base excision repair
zro03420  Nucleotide excision repair
zro03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:zro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ZYRO0F11572g
   03410 Base excision repair
    ZYRO0F11572g
   03420 Nucleotide excision repair
    ZYRO0F11572g
   03430 Mismatch repair
    ZYRO0F11572g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:zro03032]
    ZYRO0F11572g
   03400 DNA repair and recombination proteins [BR:zro03400]
    ZYRO0F11572g
Enzymes [BR:zro01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     ZYRO0F11572g
    6.5.1.6  DNA ligase (ATP or NAD+)
     ZYRO0F11572g
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     ZYRO0F11572g
DNA replication proteins [BR:zro03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    ZYRO0F11572g
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     ZYRO0F11572g
DNA repair and recombination proteins [BR:zro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     ZYRO0F11572g
   NER (nucleotide excision repair)
    Other NER factors
     ZYRO0F11572g
   MMR (mismatch excision repair)
    Other MMR factors
     ZYRO0F11572g
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Phasin
Other DBs
NCBI-GeneID: 8205468
NCBI-ProteinID: XP_002497702
UniProt: C5DYA8
LinkDB
Position
F:949236..951431
AA seq 731 aa
MLARVHQLSVIGVRRFGMATSSSQPKKQAKQATLAKFFSSVKDRNSPTKKNATPAFPTTT
NVKRESPVRSNSNEKESSPMFDDSNGRSSACSSAGLEMESAPAPKKLKMESDSNSTSKNN
QDDHFSTVPYADVCNIFQEIESTSSRLSIIKICSDFFTQIVKEDSRNLVPTTYLFINKLG
PDYEPGMELGLGEGLLMKTISESCGKSLAQVKNRYREMGDLGQIAMEARNVQPTMFKPKP
LTVGEVFVNLRNIANAQGKDSQNKKIKLIKRMLTACQGVEAKFLIRSLESKLRIGLAEKT
VLISLSNALLRHEQGLDVEPSDEAVDKAEQSIRDAFCQVPNYEIVINTCLEHGISQLHKH
CQLTPGIPLKPMLAKPTKAITEVLDRFQGQLFVSEYKYDGERAQLHLLPDGTMRIYSRNG
ENMTERYPEIDIRDFLSDPSTESLILDCEAVAWDKEQGKILPFQVLSTRKRKDVDAKDVK
VRVCLFAFDLLCHNGEPLINKSLRERQDDLQKVTKPVDGEFRYANKLITANIEELQHFLD
QSVKDSCEGLMVKMLDGPESHYEPSKRSRNWLKLKKDYLNGVGDSLDLCVLGAYYGRGKR
TGTYGGFLLGCYNQDTGEYETCCKIGTGFSEELLQQLYDRLKPTAMEAPAAFYVYDSAQQ
PDVWFEPTLLFEVLAADLSLSPVYKAGSAQYDKGISLRFPRFLRIRDDKSVEEATSSEQV
VDLYEAQAHLS
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgcttgccagggtacatcaactctctgtcatcggtgtaagacgttttggaatggctact
tcatcatctcaacccaagaaacaggcaaaacaagctactttggccaagtttttctcttct
gtcaaagatagaaactcacccaccaagaaaaatgccacacctgcttttcctactactacc
aatgtgaagcgcgaatcacctgtaagatccaattctaatgaaaaggagagtagcccgatg
ttcgatgattctaacggtagatctagcgcatgttctagcgcaggattggaaatggaatcg
gcacctgctcctaaaaaattaaagatggaatccgattccaattccacttctaagaataat
caggatgaccatttctctacagtgccctatgcagatgtttgtaacatttttcaagagatt
gaatcaacatcatcacgtctgtcgatcatcaaaatatgttcagatttctttacccagatt
gtgaaggaagattccaggaatttagtgcccaccacctatctattcatcaataaattgggt
cctgattatgaacctgggatggaattgggtcttggtgaaggacttttaatgaagactatc
agtgaatcatgtggtaaatcattagcgcaggttaaaaatcgttatagagaaatgggggat
ttaggacagatcgccatggaggcacgtaatgttcagccaacaatgttcaaaccaaaaccc
ttgaccgtgggggaagtctttgtcaacttgagaaatatcgctaatgcacagggtaaggat
tctcaaaataaaaagataaaattgattaaaaggatgctaactgcctgccaaggtgttgaa
gctaaatttcttattagatctttagaatctaagttgagaattggtctggcggagaaaaca
gttctcatttcgttgtcgaatgccttgttaagacacgaacaaggtcttgacgtggaaccg
tccgacgaagccgttgacaaggcggaacaaagcattagagatgccttttgtcaagttccc
aactacgagattgtaataaacacttgtttagagcacggaatttctcaattgcacaaacac
tgccaattgacccccggtataccgctgaaaccgatgttggctaaacctacaaaggctatc
accgaagttctggacagatttcaaggccaattgttcgtatctgaatacaagtacgatggt
gaaagagcccaattacatttactacctgacggtaccatgcgtatttattctcgtaacggt
gaaaatatgaccgagaggtatccagaaatcgatatccgtgattttctatcggaccctagc
acggaatctttgattttagattgtgaagctgttgcctgggacaaagaacaaggcaaaatc
ctaccattccaagtcttaagcacacgtaagcgcaaggatgtagatgctaaggatgtcaaa
gtacgtgtctgtctatttgcatttgatctgctgtgccataacggcgaacccttgattaat
aaatctttgcgcgagcgtcaagacgatctgcaaaaagtgaccaaacctgtagatggtgaa
tttcgatatgccaacaagctcattacagcaaacatagaggagcttcagcacttcctagat
caatctgttaaggactcatgcgaagggctcatggttaagatgttagatggtccggaatct
cattacgagcccagcaagcggtctcggaactggctgaaattgaagaaagactatttgaac
ggtgtaggagactctcttgatctatgtgttttaggagcttattacggtagaggtaagcgt
acaggtacctatggtggattcttactagggtgctacaaccaagatacaggtgagtacgag
acttgttgtaaaataggtactggtttttcagaggaattacttcaacaattatacgatagg
ttaaagccaactgccatggaagcgcctgctgcattctacgtttatgactcagctcaacaa
ccagacgtatggttcgaacccacattacttttcgaggtgctagctgccgacctgtctcta
tcgccggtgtacaaggcaggttctgcccagtatgataagggaatttcgttgaggttccca
cggttcctgagaataagagatgacaagtctgtcgaggaggcaacatcctccgagcaagta
gttgatctatatgaggctcaagctcacttatcctga

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