Zymoseptoria tritici: MYCGRDRAFT_42271
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Entry
MYCGRDRAFT_42271 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K14284
nuclear RNA export factor
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03008
Ribosome biogenesis in eukaryotes
ztr03013
Nucleocytoplasmic transport
ztr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MYCGRDRAFT_42271
03015 mRNA surveillance pathway
MYCGRDRAFT_42271
03008 Ribosome biogenesis in eukaryotes
MYCGRDRAFT_42271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_42271
03009 Ribosome biogenesis [BR:
ztr03009
]
MYCGRDRAFT_42271
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MYCGRDRAFT_42271
mRNA cycle factors
Stress granule specific factors
MYCGRDRAFT_42271
Ribosome biogenesis [BR:
ztr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
MYCGRDRAFT_42271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAP_C
LRR_4
LRR_9
RRM_9
Motif
Other DBs
NCBI-GeneID:
13396968
NCBI-ProteinID:
XP_003852646
JGI:
Mycgr3_42271
UniProt:
F9XC14
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Position
5:complement(1201578..1203506)
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AA seq
642 aa
AA seq
DB search
MPGATRRGGGGAKRHARADRDGDVTMDAATKSRGRIGKAKASKDTPSRTPKNGVFGKNAQ
RNILRQAAAGDVNMKEGSKTLRTGPVELQITGWTKSKASDGNDRGVSALIKWLEKKASLR
LGSGRREVRINKSRVVEDDLFVTVPEQDATALKRMNGYGWAGATISIKRTGGNDDGPAVS
SQAEKTKAMLRGVLERRYNPDIKFLDLSALGQDEELKSQQIFDNKSTASKFFPAMMKVLS
MVFDTQAELNAAIESVSLANNELADLKSISSLSETLPKLHNLDLSHNKFENLASLDRWRK
RYLHLQHIVINNNPLEQNEPEYATSFLKWYPELRMINNVQVRTEEELAAASYLPFPIKSP
LFFDVDGIGEQFIRNWFLGFDTDRRALANMYYDHLSDFSYALNTAAPRDPSATVSLEKQE
WDYYIKNSRNLKKISQLPARVNREFHGPKDVGDLFDSLPKTKHADLGTEASKWIIEGHAQ
TGIPDTTTLTPGGVDGFRITLSGEYDELDDTTGQPTKKRSCDHSIVLGPGGPTGVRVVSH
HITIRAYGGTQAFKAPAASPPQAQPEAAQNNETLEPPILPSNLTLEVAEAMVFELTKRTN
MTLPMSKTCLEQTGWDFDTALAAFENVKGTLTAEAFNAVPVA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcgctacccgtcgcggcggtggtggtgccaagcgccacgctcgcgcagaccgc
gacggcgacgtcacaatggacgccgcaaccaaaagccgaggtagaatcggaaaagcgaaa
gcctcgaaggacacaccatctcgcactcccaagaacggagtcttcggcaagaatgcgcag
cgcaacatcttgcgccaagccgcagccggagatgtcaacatgaaggaaggaagcaaaacc
ttgcgcacaggcccggtcgagctccagatcaccggctggacaaaaagcaaggcttccgat
ggaaatgacagaggcgtcagcgctctgatcaaatggctggaaaagaaagccagtttaaga
ctaggctcgggacgcagagaagtgcgcatcaacaagtcacgtgtcgtggaagacgacctg
ttcgtcaccgtccccgagcaagacgctaccgcgctcaagcgcatgaacggatatggatgg
gcaggagcaaccatcagcatcaagcgaacaggaggaaacgacgatggtcccgcagtttcc
tcccaagcggaaaagacaaaagcgatgctccgaggcgtcctcgagcgccgctacaacccg
gatatcaaattcctggatctttccgcgttgggccaagacgaagaattgaagtcacagcaa
atcttcgacaacaaatcgacggccagcaaattcttcccggccatgatgaaggtcctcagc
atggtcttcgacacccaagccgagctcaacgccgcgatcgagagcgtctctctcgcaaat
aacgagcttgccgacctgaaatcgatctccagcttgtcggaaacactaccgaagctacac
aacctcgacctctcgcacaacaaattcgagaacctcgcctctcttgaccgatggcgcaaa
cggtatcttcatttgcagcacattgtcatcaacaacaatccgctcgaacagaacgagccg
gaatatgccacatcatttctcaagtggtatcccgaacttcggatgatcaacaacgtccaa
gtccgcaccgaggaagagcttgcagcagcgagttatcttcccttcccaatcaagtcgcca
ctcttctttgacgtagatggcatcggagagcaattcattcgaaactggtttctcggcttc
gacaccgaccgccgggctcttgccaacatgtactacgaccacctctcggacttctcatac
gcccttaacacagcggcgccacgagatccatcagcgacggtctcattggagaagcaagaa
tgggactactacatcaagaacagccggaatcttaagaagatttcgcagctgccagcacgt
gtgaaccgggagtttcatggacccaaagatgtcggcgatctgttcgactctcttccaaag
accaagcacgcagatcttggcacagaagccagcaagtggatcatcgagggacacgcgcag
actgggatcccagacaccaccacgttaacacccggcggcgtcgacggcttccgtattacc
ttgtcgggcgaatacgacgagctcgacgacacgactggccagccgactaagaagcgcagc
tgcgaccattccatcgtccttgggcctggtggacccactggagttcgcgtggtcagccac
cacatcacaatccgcgcatacggcggcacacaagcgttcaaagcgcctgccgcatcgcca
cctcaggcgcaacccgaagcggcccagaacaatgagactctggagccaccgatcctccca
tccaaccttaccttggaggtggccgaggcaatggttttcgaattgaccaagcgtacgaac
atgacgctgccaatgtcgaagacctgccttgagcagacgggatgggacttcgacacggca
ttggccgcgttcgagaatgtgaaaggaactctgacggcagaggcgttcaatgccgtgcct
gtcgcatga
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