Zootoca vivipara (common lizard): 118079736
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Entry
118079736 CDS
T07275
Symbol
SIX4
Name
(RefSeq) homeobox protein SIX4
KO
K15615
homeobox protein SIX4
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zvi03000
]
118079736 (SIX4)
Transcription factors [BR:
zvi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
118079736 (SIX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
DUF4611
Motif
Other DBs
NCBI-GeneID:
118079736
NCBI-ProteinID:
XP_034960131
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Position
LG1:complement(8196791..8224635)
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AA seq
799 aa
AA seq
DB search
MSSASPTAPIPGVVAAIKQENVLADMLSGVGAPEKAAREGCAPPFARKQEEDDDGEDEDD
EEEAAAEAADQVLLHAELLVRNQHQRHAALASAVACSSPSPASPCSSSPPQAPLAFSPEH
VACVCEALQQGGHLDRLARFLWSLPRSDLLRGNESLLKARALVAFHQGLYAELYGILESH
SFDAANHALLQELWYKARYSEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKE
RSRNALKELYKQNRYPSPAEKRNLAKVTGLSLTQVSNWFKNRRQRDRNPSEPQSKSESDG
NPSTEDESSKGQEDLSPHPLASASDGSATLNLPGHLEPVYMQQLGNSKISLSSPGVLLNG
NLVPANPSPVFLNGTSFIQGPNGVLLNGLNVGATSQAVQLNPPKTSPSALSNGMPLADML
ASSSEDVKDFKILQTSMSNSAAPSTTTTTAYSPSSAPFSGLIPSLEVKREESEEAIASQD
GSSVVTFTGPVQINQYGVVQIPNSATNGGQLLNGGISFSPVQLPPVSTATSQGNLPLNQS
TPSSGTFTSDSAGTQQGKVFFSNLPPSAVVYTLPNSSQAIGPVKQEGLEASLVFSQVMSL
GQNPQLHATLPSDSLSGGGLQAGPSSLVNVTLSHNFSLGPPTLINSEELGSPVSESPPLS
APATSGATVVSITNSNYATLQNCSLLAGHDLMSISATQTALGGIGPAIGSHVGPHPSLQV
HPHFAPREQRLVLQPVTSLKENFMSEAESKSASGLMMLDSKTKYVMSNMVDAICEELETD
KKQLAKLQTVQMDEDMQDL
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctgcctcccccaccgccccgatccccggcgtggtggcagcgatcaagcaggaa
aacgtgctggcggacatgctctccggcgtcggggcgcccgagaaggcagcccgggaaggc
tgcgcgccgcctttcgccaggaagcaggaggaggacgacgacggggaagacgaggacgac
gaggaggaggcagcggcggaggcggcggaccaggtcctgctccacgccgagctgctggtg
cgcaaccagcaccagcgccacgctgccctcgccagcgcggtcgcctgctcctcgccgtct
cccgcctcgccttgctcgtcgtcgccgccgcaggctccgctggctttctccccggagcac
gtcgcgtgcgtgtgcgaggctctccagcaaggcggccacctggaccggctggcgcggttc
ctgtggtcgctgccgcggagcgacctgctacgtggcaacgagagcctgctgaaggcgcgc
gcgctggtggctttccaccagggtctttacgcggagctgtacggcatcctggagagccac
agcttcgacgccgccaaccacgcgctgctgcaggagctctggtacaaggcgcgctacagc
gaggcggagagggcccgcgggcggcccctgggcgccgtcgacaagtaccgcctgcgcagg
aagttccccttgccgcggaccatctgggacggcgaggagacggtgtactgcttcaaggag
aggtcgcgcaacgcgctcaaggagctctacaagcagaaccgctacccgtcgcccgccgag
aagcgcaacctggccaaggtcaccgggctctcgctcacgcaggtcagcaactggttcaag
aaccgacggcagagggatcgcaacccctctgagccgcagtccaagagcgagtcggatggc
aaccccagcacggaagatgagtccagcaaggggcaagaggacttgtctccccacccgctt
gccagcgcctctgacggaagtgccaccttgaaccttcctggccacttggagcccgtctac
atgcagcagcttggaaactccaaaatatctctaagctccccgggggttttgttgaacggg
aacttggtgccggccaacccgtcccccgttttcctcaatggcacctctttcatccagggg
cccaacggggtcctcctcaacgggctcaacgtgggcgccacctcgcaagcggtgcagttg
aatccgcccaaaacgtctccgagcgctttgagcaatggcatgcccttggccgacatgctg
gcctcttcgtcggaagatgtgaaagacttcaaaatcctccagacttccatgtccaattcc
gcagccccgtcgacgacaacgacgacagcatacagccccagttctgcccctttctcaggt
ctgataccgagccttgaggtgaagagggaagaaagcgaagaagccatcgcctcgcaagac
ggcagctccgttgtgaccttcacaggccctgtccaaataaaccaatatggcgtcgtccag
attcccaattcggcaacaaacggaggccagctcctcaacgggggcatcagtttttcgccg
gtccagctccctcctgtgtcaacagcaacttcccaaggcaacttgccgctaaatcaaagc
acaccgagcagcggcacgtttacaagcgactccgctgggacgcagcaagggaaagtgttt
ttcagcaaccttcctcccagcgcggtggtgtacacgctccccaactcgagccaggccatc
gggccagtcaagcaggaagggctggaggccagcctggtgttttctcaagtaatgtccctc
ggccagaacccgcaactccacgcaaccctgccttcggacagcctctccggcgggggcctg
caggcagggccttcctcgctcgtcaacgtcaccctgtcacataacttttccctgggaccg
cccactctgataaactccgaagaacttggctcgcccgtgtccgagagcccacccctgtcg
gcccccgccacaagcggggctaccgtggtttccatcaccaactcaaactatgcaacactc
cagaactgctccctcctcgctggccacgacctgatgtccatttcggcgacgcagacggca
ctcggggggatcggcccggccattggcagccacgttggaccccacccgtcgctgcaagtt
cacccccatttcgccccccgggagcagcggttggtgctacagccggtcaccagcctaaag
gaaaacttcatgtccgaggccgagagcaaatccgctagcggcttgatgatgctggattcg
aaaaccaaatacgtaatgagcaatatggtcgacgcaatctgcgaggagctggagacagac
aagaagcagctggccaagctccagactgtgcaaatggacgaagatatgcaagacttgtaa
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