Zootoca vivipara (common lizard): 118095327
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Entry
118095327 CDS
T07275
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03440
Homologous recombination
zvi03460
Fanconi anemia pathway
zvi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118095327 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
118095327 (BRCA1)
03460 Fanconi anemia pathway
118095327 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zvi01009
]
118095327 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zvi04121
]
118095327 (BRCA1)
03036 Chromosome and associated proteins [BR:
zvi03036
]
118095327 (BRCA1)
03400 DNA repair and recombination proteins [BR:
zvi03400
]
118095327 (BRCA1)
Enzymes [BR:
zvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118095327 (BRCA1)
Protein phosphatases and associated proteins [BR:
zvi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118095327 (BRCA1)
Ubiquitin system [BR:
zvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118095327 (BRCA1)
Multi subunit Ring-finger type E3
BRCC complex
118095327 (BRCA1)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
118095327 (BRCA1)
DNA repair and recombination proteins [BR:
zvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
118095327 (BRCA1)
BRCA1-A complex
118095327 (BRCA1)
BRCA1-B complex
118095327 (BRCA1)
BRCA1-C complex
118095327 (BRCA1)
BRCA complex
118095327 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
118095327 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
BRCT_2
zf-RING_2
zf-C3HC4_3
zf-RING_6
zf-Nse
zf-RING_5
zf-ANAPC11
RTT107_BRCT_5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
118095327
NCBI-ProteinID:
XP_034992383
LinkDB
All DBs
Position
LG13:complement(8787028..8835673)
Genome browser
AA seq
1702 aa
AA seq
DB search
MWQEWGKGVEDIMDSSVPSIAEVRGILLAMQKNLECPICLEVIKEPVSTNCAHIFCSFCM
FKLLKQKKGVVRCPLCNAKVTKRSLWEDVRFKQVIKVVLEAIRGFEHDTGLKFSDDLCFP
KKGLEDASASVSQKEKQVIDCKGYRDRLKSMKEVKKRNASLEGETSNLPLVGGTRRSLRK
KSNSSKFTVFEIGSDSSEDAFKKADTIKCVSLRRNYPARVDEGRAKNESPSPFHMEFSEL
SAEDETSLNILGVCDYLEGLGNTEGTMASTGKLEILEKNAAVAKSQGLSSPDPCLGKHDR
NSNSVPEGGSCSLLNMAPLVGEATKPTADKQAGHDAGNVSMGLPSGSKHILCENEEQLLQ
SQTSPERPLSQVSGKKLMRSIQKVKAWLSKSKEGLSPRSLQDIHTQEVDQDPDLSDGDSL
VSQKTEQIGDQKLFTVECEGDRSLPKPVASKAEDKLFGRTYKRKHKSTLLWNKSETVRIQ
AKEGVAMNTESCDAPVKRLSRKRKATSELLPDDFIRRQDVEVNSRRPGGDEDVALEEGGQ
VPALVDDSPVADQKEVELPTEFPVKEGLSVLETDLNEPSQSICQKSPESNLNHLKKKSNT
LSKIRRQLIKPVGALQLMMDRSSRSPERAKIQTNDKLREAGAGRVQVRRSRRLQLSTEET
WRRSEPVKRGRKQLDKRETKKRRWSHEENMTTSSIAENYPNVLQGRLQKDLSLSDTSLMD
VEGDASEACANPPASPQVGVEQTTEGSSPCCIVPSASSQDSCSLLHFASPEVEQTTSEDK
QLTVAHQTEKNVLCTQKLEGDEFCTGDMMRSCKPPETNDEAAGTLELNSETEDSELDTNF
MQKIFNGCKRQSFLLHPVKESAAEIQKETRIGLGEDGKVDCLKKSTCIDKFCEERRDAVA
CEVNSSVQRLASCATGFPDHERRTEHPQLASKTVFPDHPSTPDQLASKNPDSPQQSQKPV
TKKSTSPQIRGEVANSNNSSSSGSPNVWRNGIIQSTSLSVINETSSSIDNSEDAESESTK
NKGLALSAQPEFIQPCPVICQLPHSEFCGIQGEKNSPMEQKQLHSDTEEATNNCSTGAPR
SLVHSNNMEQCAEEESHGFELSSETPEGLLGPVIRSIEGSPNLGEIERRDSLAMSPATEE
HTPLKRDLGSGNRRSSRLSHKGLIRTQQRWARKLPSSEEDSSEDEELPSFQALIFGKSAS
TPLEPLKKKTSGGVPALKSSSKCNVETKDEHVCPSQDSECSMKLFSSQSHTAEDFRSRPH
DSRHLTPAPTSRANLESLSGDKKATQPRDEVSKDAGQQKDEQQEQVDSEFNLGEETLDYD
SEASCLGDSSGLSSQSEILTTQQKTAMRNSLKKLQQKMAILKEVLKQGSQSAVCEGSPLP
GEEDDFTGGQTRSARGSKADLTSESKQSLQGAFSTPVRNMQGTPGSSTSKEQIPSLLATE
TAMGPPAATHDAGRQSALRHSAQGSPVLPLSRTTHCSASKGNSKSPFLTSKRNMSLVASG
LNQGELRLVQMFARKNESTWSNKISNETTHVVMKTDEDLVCERTLKYFLGIAGQKWVVSY
HWVVQSLKERRVLNEEDFEVRGDMINGRNHQGPKRARESPTGKLFQGLEICCYGPFTDML
PEQLEWMVELSGASIVKEPLLFSHSANSTAVVVVQPEAWGEDTACQGIPPQCSATVVSRE
WVLDSIACYQRQAFDEYILQQV
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaggagtggggaaaaggtgtagaagacattatggattcttccgttccaagcatt
gcggaggttcgtggcatattgctggctatgcagaagaacttggaatgtccaatatgcctg
gaggtaataaaggagccagtctcaacaaactgtgcccacatcttctgcagtttctgcatg
tttaagctccttaaacagaagaagggtgtggtacggtgtccactttgcaatgccaaagtc
accaaaagaagtctatgggaagatgtccgatttaagcaagtaatcaaagtggtgctggaa
gccatccgtggttttgaacatgacacggggctcaagttttcagatgatctgtgtttcccc
aagaaaggtttagaagatgcttctgcttcagtttcacagaaagaaaaacaagtcattgat
tgtaaaggctacagggacagactgaagagtatgaaggaagtgaaaaagagaaatgctagc
ttggaaggtgagacctccaacttgccattagttggtggaacaaggcgctccctgagaaag
aaaagcaattccagtaaattcactgtgtttgaaattggatcagactcttctgaagatgca
tttaagaaggcagatacaatcaaatgtgtgagtttaagacgaaattatccagctcgagtt
gatgaagggcgtgccaagaatgaaagcccaagcccttttcacatggagttttctgagctg
agtgctgaagatgagacatcattaaatatcctaggtgtatgtgattatttggaaggtctt
ggaaacacagaaggaactatggccagcactggaaagttagaaattcttgagaagaatgct
gctgtggcaaagagtcagggtttgtcttctccagatccctgcttgggtaaacatgacagg
aactccaattccgtgccagagggtggttcttgctctttactcaacatggcaccattggtt
ggtgaagccacaaagcccactgcagataaacaggctggtcatgatgcaggaaatgttagt
atggggctgccttctggaagtaaacacatcctgtgtgaaaatgaggaacagctactgcag
tcacaaacttcccctgagcgtcctctgagtcaagtctctgggaagaaactgatgcggagc
atccagaaagtcaaagcatggctgtctaaaagcaaggagggtctttctccaagatccttg
caagatattcacacacaggaggtggatcaagatccagacttgtcagatggagactctctg
gtctcccagaagactgagcagattggagaccagaaactgttcacagtggaatgtgaaggt
gacaggtctttgcccaagccagttgcctctaaagctgaagataaactatttgggagaaca
tacaagaggaaacacaaatcaacccttctttggaataagagtgaaacggttcgtatccaa
gcaaaggaaggcgttgctatgaatacagaatcctgtgatgcacctgtaaaaagattatcg
agaaagaggaaggctacatctgaattgctaccagatgacttcattaggaggcaagatgtg
gaagtaaatagtaggaggcctggtggagatgaagatgttgctttggaagaaggtggccaa
gttcctgctcttgtagatgatagccctgtggcagatcaaaaggaagttgagctgccaact
gaatttcctgtcaaggaagggctgtctgttttggaaactgatttaaatgaaccatctcag
agtatatgccagaaatcgccagaatcaaaccttaaccatctaaagaaaaaaagtaacact
ttgagcaagatacgtagacagttaatcaagcctgttggtgcattgcagttaatgatggac
agaagctccaggtcccctgagagggcaaagatacagactaatgataagttaagggaagct
ggcgcaggccgtgtgcaagtcagacggagcagaaggcttcagttgtcaacagaagaaacc
tggaggagaagtgagccagtaaagcgaggaaggaaacagttggataagagagagacaaag
aagcgtaggtggtctcatgaagaaaacatgacaacgtcttccatagcagaaaattacccc
aatgtattgcagggcaggctccaaaaggacctatctttgtcagataccagcctgatggac
gtggaaggggatgcaagtgaagcttgtgctaaccctccagcttctcctcaggtaggtgtt
gaacaaaccacagagggcagcagtccttgttgcattgttcccagtgcaagttcccaggac
agctgctcacttctgcattttgcttctccggaggtggagcaaaccacttctgaggacaaa
cagctcacagtagcacaccagactgagaagaatgtgttatgtacccagaaactagagggc
gatgagttttgcacaggggatatgatgagaagctgtaaaccccctgaaacaaatgatgaa
gctgcaggaactttggagctgaactcagaaactgaggacagtgaactggatacaaacttc
atgcagaagatattcaatggctgcaaacgccagtcattcttgttgcatccagtaaaggaa
tctgctgcagaaattcaaaaagagacccgcattggcttgggggaagatggcaaggttgac
tgtttgaagaaatcgacttgcatcgataaattttgtgaggagagaagagatgctgttgcc
tgtgaggtgaacagctctgtccaaagactggcatcttgtgctactggtttccctgatcat
gagaggagaactgagcacccgcagcttgcctcaaaaactgtgttcccagatcatccatcc
acaccagatcaattagccagcaagaatcctgacagtcctcagcaaagtcaaaagccagta
actaaaaagagtacgtcccctcaaattaggggagaagttgcaaactcaaataacagcagc
agcagtggaagcccaaatgtctggagaaatggcatcatccaaagcaccagtttaagtgtc
attaatgagacaagttctagtatagacaactctgaagatgcagaatctgaaagcactaaa
aacaaagggctggccttaagcgctcagccagaattcatacagccatgtcctgtaatttgt
cagctaccacattctgaattctgtggcatccaaggtgaaaagaatagccccatggaacaa
aagcaactgcatagtgacacagaagaagcaaccaataattgcagtacaggcgctcctagg
agtttggttcacagtaataatatggaacagtgcgctgaggaggagtcccatggctttgag
ctgtcctcggagacaccagagggcttgctgggccctgtcatcagaagcatagagggctca
cctaaccttggggaaatagagaggagagatagcttggccatgtctcctgccacagaggag
cacaccccacttaagagagacctgggtagtggcaacagaagaagttccaggctgagccat
aaaggcctcattcgcacacagcagagatgggcacggaagctgccatcctcggaggaagat
tccagtgaagatgaagagttgccatcctttcaggcactgatatttggcaaatcggcaagc
acaccgctagaaccattgaaaaagaagacatcgggaggggtgccagcactgaagagcagc
agcaaatgtaatgtagaaaccaaggatgagcatgtctgtccaagtcaggattcggagtgc
tctatgaagttgttttcttcccagtcacacacagctgaggatttccgcagcaggcctcat
gactcaagacacttaactccagctcccacttctagagcaaatctggaaagtcttagtggg
gataaaaaagccactcaacccagggatgaagtctcaaaagatgctggacaacagaaagat
gaacagcaagaacaagtggattcagaattcaatttaggtgaagagaccttggactatgac
agcgaagctagctgcttgggggattcatcaggcctttcttcccagagtgagattctcacc
acacagcaaaaaactgccatgcgaaacagcttaaagaaactccagcagaagatggctatt
cttaaagaagttctcaaacagggaagccagagtgctgtctgtgaaggatcaccgcttcct
ggtgaggaagatgatttcactggaggacagacaagatcagcaaggggaagtaaagcagat
ttgacttctgaaagtaagcaaagcctccaaggtgccttttctacccctgtgagaaacatg
caagggactccagggtcctcaacgtctaaagagcagattcccagccttttggccacagag
acagcaatggggcctcctgctgccacacatgatgcaggaagacaaagtgcattgaggcat
agtgcacaaggaagtccagtcttgcccttgtcacgaaccacacattgtagtgcaagcaaa
gggaattcaaagagtccatttctgacaagcaagaggaatatgtctctggtggcctcaggt
ctgaaccagggcgagttgcgactagtacagatgtttgccaggaagaatgagagcacttgg
tctaataagatttctaatgaaacaactcatgtagtaatgaaaacagatgaggatctggtt
tgtgagcggaccctgaaatacttcctaggtattgctggacagaagtgggtggtgagctac
cattgggttgtacagtcactgaaggaaagaagagttcttaatgaggaggacttcgaagtt
agaggcgacatgatcaatgggagaaaccatcaaggacccaaaagagcaagggaatctccc
actggaaagcttttccaaggcttagaaatatgctgctacgggccattcactgatatgctc
ccagaacaattggagtggatggtagagctgtccggcgcctctattgtgaaagaacctctc
ttattctcacattcagcaaactctactgctgtggtggtcgttcagcccgaagcttggggg
gaagacactgcctgccaagggatcccaccgcaatgcagtgctactgtagtctcacgagag
tgggtgctggacagtattgcatgctatcaacgccaggcatttgacgaatacatcttgcaa
caggtgtga
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integrated database retrieval system
