Zootoca vivipara (common lizard): 118097569
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Entry
118097569 CDS
T07275
Symbol
CACNA1F
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1F
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04010
MAPK signaling pathway
zvi04020
Calcium signaling pathway
zvi04260
Cardiac muscle contraction
zvi04261
Adrenergic signaling in cardiomyocytes
zvi04270
Vascular smooth muscle contraction
zvi04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118097569 (CACNA1F)
04020 Calcium signaling pathway
118097569 (CACNA1F)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
118097569 (CACNA1F)
09153 Circulatory system
04260 Cardiac muscle contraction
118097569 (CACNA1F)
04261 Adrenergic signaling in cardiomyocytes
118097569 (CACNA1F)
04270 Vascular smooth muscle contraction
118097569 (CACNA1F)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zvi04040
]
118097569 (CACNA1F)
Ion channels [BR:
zvi04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118097569 (CACNA1F)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
FAM176
HemY_N
Motif
Other DBs
NCBI-GeneID:
118097569
NCBI-ProteinID:
XP_034996432
LinkDB
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Position
LG16:40128722..40192142
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AA seq
1969 aa
AA seq
DB search
MTIFANCVALGVYIPFPEDDSNVSNHNLEQVEYVFLIIFTVETFLKILAYGLVMHPSAYI
RNGWNLLDFVIVVVGLFSVILEQVSHKPGEAHHMSGKPGGFDVKALRAFRVLRPLRLVSG
VPSLHIVLNSIMKAMVPLLHIALLVLFVIIIYAIIGLELFIGRMHKTCFIVGSDLEAEED
PSPCAFSGHGRECLTNNSECRGKWEGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWM
QDAMGHELPWLYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQMEE
DLKGYLDWITQAEDIEPDEEGDEADEKHTRVTVADLTEKKKKRWFRYSSHSTDTHTSLPA
SETTSVNTENVGEEEHHHNNCCDVCLGKLSKTKFGRRVRRTNRLFRKKCRLAVKSVSFYW
MVLILVFLNTLTIASEHYNQPDWLTQIQAYANKVLLSLFTMEMLLKMYSLGLQAYFVSFF
NRFDCFVVCGGILETVLVEFEIMQPLGISVLRCVRLLRIFKVTRHWASLSNLVASLLNSM
KSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDTFPQALLTVFQILTGEDW
NAVMYDGIMAYGGPYFPGMLVCVYFIILFICGNYILLNVFLAIAVDNLADGDNINTSKEV
EHKEKEAPAEGEQSNEKEEEKNVKVECGEEDEEEVEEGSEEAGEEEEEEEAEGDQQSLAE
SHLDKLEETPAEKVLPIPDGSSFFCLSKTNPLRVGCHKLIHHHIFTNLILVFIILSSISL
AAEDPIRAHSFRNNILGYFDYAFTSIFTVEILLKMTAYGAFLHKGSFCRNWFNLLDLLVV
SVSLISFGIHSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTT
LLQFMFACIGVQLFKGKFYSCTDEAKHTPDECKGTFIVYKDGDVAHPMVRERAWLNSDFN
FDNVLSGMMALFTVSTFEGWPALLYKAIDANAENEGPIYNYRVEISIFFIVYIIIIAFFM
MNIFVGFVIITFRAQGEQEYKNCELDKNQRQCVEYSLKAQPLRRYIPKNKYQYKFWYMVN
STGFEYIMFVLIMLNTIALAVQHYEQSQPFNYVMDLLNMVFTGLFTVEMVLKIIAFKPKH
YFCDAWNTFDALIVVGSVVDIAVTEVNNGGHVGESSEDSSRISITFFRLFRVMRLVKLLS
KGEGIRTLLWTFIKSFQALPYVALLIAMIFFIYAVIGMQTFGKVAMQDATPINRNNNFQT
FPQAVLLLFRCATGEAWQEIMLASLPGKRCDPESDYEPGEEFTCGSNFAIVYFISFFMLC
AFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPAAKGRIKHLDVVTLLRR
IQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVTFNATLFALVRTSLKIKTEGDLDVANK
ELRAVIKKIWKRTKPKILDEVIPPPEEEEVTVGKFYATFLIQDYFRKFRKRKEKGMLGPD
GSPSNSTALQAGLKSLQDLGPEIRRAMSCDLEEEEEAEETVCEEETVTYKSSEALYGSAP
DHHVSAASPDGENKTLMNGLVGSRHPSSVSLSHMTNGPTHYEENVGGKDEPAELPNIPTR
RRLSRRSSDGGGIPPTVHEEATHTEDYREDTSVEQGYYSREEDSESLASRDRQACLHTPQ
PHRRRWDNGYGGSLPLPSRRINNGMVNGMLDGRQPKRRRLLPPTPTGRKPAFSIQCLQRQ
GSCDDIPIPGTYHQNAPPCRARAQGYGSYDSWHSGSHSSTASSQSWATPPKRGRLLYAPL
ILVEEDGLPGHSWEKNSNSLPPMSRARWYMNEPELPYRSYGQLRVPGPLKHSYSDKPGSA
DSLVEAVLISEGLGLYARDPKFVAFTKREIADACHMTIDEMESAATDLLSRKLPGSESSG
RGSGAHALYSSDGEHSGAGNLGPVYSDEEPFRSREEEDLGDEMACVTSY
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcttcgccaactgtgtggccttaggagtctatatccccttccctgaggatgac
tcgaatgtctccaaccacaacttggagcaagtggagtatgtttttctcatcatatttacg
gtggagactttcctcaagatccttgcctatggactggtcatgcaccccagcgcctacatc
cgcaatggctggaaccttctcgattttgtcatcgttgtggtgggtctcttcagtgtcatc
ctggaacaagtttcccacaagcctggggaggctcatcacatgagtgggaagccgggtggg
tttgatgtcaaagctctgagagccttccgtgtcctgagacctctgcgcctcgtctctggt
gtccctagcctgcacattgtcttgaactctatcatgaaagccatggtgcccctcctgcac
attgcgctgcttgtccttttcgtcatcatcatctatgccatcattggcttggagctcttt
atcggccgcatgcacaagacctgcttcatcgttggttcagacctggaggctgaggaggac
ccatcaccttgtgccttctctgggcatggccgggaatgcttgacgaacaatagtgagtgc
cgtgggaagtgggaaggacccaatggtggcatcaccaacttcgacaacttcttttttgcc
atgctgactgtcttccagtgcatcaccatggaaggttggaccgatgtgctctactggatg
caggatgccatgggtcacgagctgccctggctctactttgtcagcctggtcatctttggc
tctttcttcgtgctcaatctggttttgggtgtgctgagtggagaattttccaaggagcga
gagaaggcaaaggcccggggtgacttccaaaagttacgggagaagcagcagatggaggaa
gacctgaagggctatttggattggatcacgcaggccgaagacatagagcctgacgaggaa
ggggacgaggcggacgagaagcacactcgcgtgactgtggcagacttgacggagaagaag
aagaagagatggttcagatacagcagtcactccactgacacccacaccagtctccctgct
agtgaaaccacctcagtgaatacggagaatgttggggaggaagaacatcaccacaacaat
tgctgtgatgtgtgtttagggaagctctccaagaccaaatttggccgccgagtgcgacgc
accaaccgtctcttccggaagaaatgtcgcctggctgtcaaatctgtctctttctactgg
atggtcctgatccttgtctttctcaacactctcacaattgcctctgagcattacaatcag
cccgattggctcacacaaatccaagcttatgctaacaaagtactgttatcgctgttcacc
atggagatgctgttgaagatgtacagcctgggactgcaggcctatttcgtcagcttcttc
aaccgctttgattgttttgtggtatgtggtggaatcctggagactgtcttggtagagttt
gagatcatgcaacctcttggaatctctgtgcttcgctgtgtccgcctcttacggatcttc
aaagtcaccaggcactgggcctcgctgagcaacctcgtggcctccttgctgaactccatg
aagtccattgcgtccttgctgctcctgcttttcctcttcatcatcatcttctcattgctg
ggcatgcagctttttgggggcaagttcaactttgatgagacccagaccaagcgcagtact
tttgacactttcccccaggccttgctcacagtcttccagatcctgacaggcgaggactgg
aatgcagtaatgtatgatgggatcatggcctatggcggcccctatttcccaggtatgctg
gtctgtgtctatttcatcatcctcttcatttgcggcaactatattctgctcaacgtcttc
ttggccattgctgtggacaatctggcagatggtgacaacatcaatacctccaaggaggtg
gaacacaaggaaaaagaggcaccagcagagggggagcagagcaatgagaaagaagaagag
aaaaatgtgaaggtggaatgtggggaggaagatgaggaggaagtagaggaaggcagtgaa
gaagcaggtgaggaggaagaggaagaggaggcagaaggagatcagcagagcttggcagag
tctcacctagacaaactggaggaaacccccgcagagaaggtgttaccaattcctgatgga
agttccttcttctgtcttagcaagacaaatccgcttcgtgttgggtgccacaaactgatc
catcaccacattttcaccaatctcatccttgtcttcatcatcctcagcagcatctccctg
gcagcagaggaccctatccgagcacactccttccgcaacaatattctgggatactttgat
tatgccttcacttctatcttcactgttgagatcctactcaagatgaccgcttacggcgcc
ttcctgcacaaaggctccttctgccggaactggttcaatctccttgatctgctggttgtc
agtgtctcactcatctcctttggcatccactccagtgccatctctgtggtgaagatcttg
cgagtgctgagggtgctgcgccctctccgagccatcaaccgggccaaggggctgaagcac
gtggttcagtgcgtgtttgtggccatccgcaccattgggaacatcatgatagtcaccacc
ctgctgcagttcatgtttgcttgcatcggtgtccagctcttcaagggcaagttttacagc
tgcacagacgaggccaagcacactccagatgaatgcaagggcacattcattgtctacaag
gatggagatgtggcccacccaatggtgcgggagcgtgcctggctgaacagtgacttcaat
tttgacaatgttttgtcgggcatgatggcccttttcactgtatctacttttgaaggctgg
ccagcgctgctttacaaggctatcgatgccaatgcagaaaacgaggggcccatctacaac
taccgggtggagatctccatcttcttcattgtctacatcatcatcattgccttcttcatg
atgaacatctttgtgggtttcgtcatcatcactttccgagcacagggagaacaggaatac
aagaactgtgagctggacaagaaccagcggcagtgcgtggagtattccctgaaggcccag
ccgttacggcgctacatccccaagaacaaatatcaatataaattctggtacatggtcaac
tccaccggttttgaatacatcatgtttgtgctcatcatgcttaacaccattgctctggct
gtgcagcactacgaacagtcccagcccttcaactatgtcatggacttgctcaacatggtc
ttcacaggcctcttcactgtcgagatggtgctgaagatcattgccttcaagcccaagcac
tacttctgtgatgcatggaacacctttgatgctctgatcgtggtcgggagtgtggttgac
atcgcagtcactgaagtcaacaatggaggtcatgttggagagagctcggaggacagctct
cgcatctccatcaccttcttccgcctcttccgtgtcatgcgcctggtcaagttgctcagc
aaaggagagggtatccgcaccctgctctggaccttcattaaatccttccaggctttgcca
tacgttgcccttcttattgccatgatcttcttcatctatgctgtcatcggtatgcagacc
tttggcaaagtggccatgcaggatgcgacaccaatcaaccgcaacaacaacttccagact
ttcccgcaggcggtgctgctgctcttcaggtgtgcaacaggggaagcctggcaggagatc
atgctggccagtttgcctggcaaacgctgtgacccagagtccgactatgagcctggcgag
gagttcacttgtggcagcaactttgccattgtctacttcatcagcttcttcatgctctgc
gccttcttgatcatcaacctctttgttgctgtcatcatggataattttgactatctgacc
cgggactggtccattctgggtccccatcatcttgatgaattcaagaggatctggtcagag
tatgatccagctgccaagggccgcatcaagcaccttgatgtagtgactctactacgccgg
atacagccccccctgggctttgggaaactctgcccccaccgagtagcttgcaagaggctg
gtggctatgaacatgcccctcaactcagatggaactgtcaccttcaacgccactctcttt
gccttggtgcggacatccctcaagatcaaaacagaaggagacctggatgtggcaaataag
gagcttcgtgctgtgatcaaaaagatctggaagcggaccaagcccaaaatcctggatgaa
gtcatccctccaccagaagaggaggaggtcactgttggaaagttctatgccacattcctg
atccaggattacttccgtaaattccgtaagcggaaggagaaaggaatgcttggtccagat
gggtccccaagcaactctactgccttgcaggctgggttgaaaagtttacaggatctgggg
cctgagatccgccgggccatgtcctgtgacctggaagaagaggaggaagctgaggaaact
gtgtgtgaggaggaaactgtgacctataagagctctgaggcgttatatggcagtgcgcct
gaccaccacgtctcggctgcttctccagacggggagaacaagactctgatgaatggcctt
gtgggctcccggcacccctcaagcgtcagcctctcccatatgactaatggaccaacccac
tatgaggagaatgttgggggcaaagatgaacctgctgaactgcccaacatccccacccgg
cgcaggttgagcaggcggagctctgatggcggtggcatcccacctacagtgcatgaagaa
gccacacacaccgaagactacagggaggacacctcagttgagcagggatactatagccgg
gaagaggactctgagagcctggcctcccgggacaggcaggcctgtcttcacactcctcag
ccccatcgtcgtcgttgggacaacggctatggcggctctttgcccctcccctcccggcgc
atcaacaatgggatggttaatggcatgctggacgggaggcaacccaagcgcaggcgcctc
ctgcctcccacacccacaggccgcaaaccagccttcagcatccagtgcctgcagcgtcaa
ggcagctgtgatgacatccccatcccagggacctaccaccagaatgcgccaccctgccga
gcacgtgcacagggctatggcagctatgactcgtggcacagtggcagccactcttcaaca
gcatcctcacagtcgtgggccacaccacctaaacggggccggttgctctatgccccacta
atcctggtggaggaggatgggttgcccgggcacagctgggagaagaacagcaacagcctt
ccacccatgtcgcgagcgcgctggtacatgaatgagcctgagctgccctaccgctcttac
ggccagctgcgtgtgcccggcccactcaagcacagctacagtgacaagcctggcagcgcc
gacagcctggtggaggcggtgctcatctctgagggtctaggcctttatgcacgggaccca
aagtttgtggccttcaccaagcgggagattgctgatgcctgccacatgaccattgatgag
atggagagtgctgccacagacctgctgagtcgcaagctccctggtagcgaaagcagcggc
cgaggtagtggtgctcacgccttgtacagcagcgacggggagcacagtggagctgggaac
ctaggtcccgtttacagcgatgaggagcccttccgctcccgtgaggaagaggacttgggt
gacgagatggcctgcgtcacttcttattga
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