Paracidovorax avenae: Acav_1188
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Entry
Acav_1188 CDS
T01445
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
aaa
Paracidovorax avenae
Brite
KEGG Orthology (KO) [BR:
aaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aaa03009
]
Acav_1188
Enzymes [BR:
aaa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Acav_1188
Ribosome biogenesis [BR:
aaa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Acav_1188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Orexin
Motif
Other DBs
NCBI-ProteinID:
ADX45110
UniProt:
F0QCW7
LinkDB
All DBs
Position
1333156..1334187
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AA seq
343 aa
AA seq
DB search
MKHIIGAKPAPGRPPADSEPGAVAVRWVEVDAESAGQRLDNFLIRELKGVPKTHVYRIIR
SGEVRINKGRAAADTRIEAGDVVRVPPVRISDKVAARAERPAPAREFPLLLEDEHLIALD
KPAGVAVHGGSGVSFGVIEQLRQARPQARFLELVHRLDRETSGILLVAKKRSALTHLQDQ
FRERETGKTYLALVSGEWPERLKVIDAPLHKYLQVDGERRVRVTTEDDPDGMRSITLVKV
RSRIPARPAEGLPAMALLEVTIKTGRTHQIRVHLASRGHPILGDDKYGDFDLNRRVQKHG
LRRMFLHAWRLQFSHPASGERVELHAELPADLSGFLPAAPAPT
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacacattataggggccaaaccggcacccggccgtccccccgccgactccgaaccg
ggtgccgtggccgtgcgctgggtggaggtcgatgccgagtccgcgggacagcggctggat
aactttctgatacgtgagctcaagggcgtgcccaagacgcacgtctatcgcatcatccgc
agcggcgaggtccgcatcaacaaggggcgggccgcggccgacacccgcatcgaggccgga
gacgtggtccgtgtgccgcccgtgcgcatttccgacaaggtggctgccagggcggagcgg
cccgcgccggccagggagttccccctgctgctggaggacgagcacctgatcgccctggac
aagcccgccggcgtggccgtgcatggtggcagcggcgtgagcttcggcgtcatcgagcaa
ttgcgccaggcacgcccgcaggcccgcttcctggaactggtgcatcgcctggaccgggaa
acctcgggcatcctgctcgtggccaagaagcgttcggcgctcacgcacctgcaggaccag
ttccgcgagcgcgaaaccggcaagacctatctggccctcgtgtcgggcgagtggccggag
cgcctgaaggtcatcgacgcccccctgcacaagtacctgcaggtcgacggcgagcgccgc
gtgcgcgtgaccacggaagacgatcccgacggcatgcgctccatcaccctcgtgaaagtg
cgcagccgcataccggcgcggccggccgaggggctgcccgccatggcgctgctggaagtg
acgatcaagaccggccgcacccaccagatccgggtccacctggccagccggggccacccg
atcctgggcgatgacaaatatggcgacttcgatctgaaccgccgcgtccagaagcacggc
ctgcgccgcatgttcctgcatgcatggcggttacagttcagccaccccgccagcggcgag
cgcgtcgaactgcatgccgaactgccggcggatctgtccggcttcctgcccgccgctccc
gctcccacctga
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