Amycolatopsis acidiphila: LWP59_02465
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Entry
LWP59_02465 CDS
T07896
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
aacd
Amycolatopsis acidiphila
Pathway
aacd00521
Streptomycin biosynthesis
aacd00523
Polyketide sugar unit biosynthesis
aacd00541
Biosynthesis of various nucleotide sugars
aacd01100
Metabolic pathways
aacd01110
Biosynthesis of secondary metabolites
aacd01250
Biosynthesis of nucleotide sugars
Module
aacd_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
aacd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LWP59_02465 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LWP59_02465 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LWP59_02465 (rfbC)
Enzymes [BR:
aacd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LWP59_02465 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UIJ60571
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All DBs
Position
481684..482232
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AA seq
182 aa
AA seq
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MRAVPVPAIAGAYLFEPTPHVDERGFFSRTFDREVVRSAGIDPDSFAQDSLSRSTKGVVR
GMHLRSGAGEAKLVRCSYGEVFDVVVDLRPGSPTYRNQEYFELSGRTQVSLYIPAGCAHG
FQALTDPADVSYRIDRPHEKSEDVTIAFDDPELAIPWPVPITLISERDKQAPTLAEALKM
SR
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgtcccggtgccggcgatcgccggcgcgtacctgttcgaacccaccccgcac
gtggacgagcgcggcttcttcagccgcacgttcgaccgcgaggtggtccggtcggcgggc
atcgacccggactcgttcgcccaggacagcctttcccgctccaccaagggcgtcgtgcgc
gggatgcacctgcgctcgggtgcgggcgaggccaagctcgtccgctgctcctacggcgag
gtgttcgacgtcgtggtcgacctccgccccggttccccgacctaccggaaccaggagtac
ttcgagctgtccgggcgcacgcaggtctcgctctacatccccgcgggctgcgcgcacggc
ttccaggccctgaccgatcccgccgacgtctcctaccggatcgaccggccgcacgagaag
tccgaagacgtcacgatcgccttcgacgaccccgaactggccatcccgtggcccgtcccg
atcacgttgatctccgagcgcgacaagcaggcgccgacgctcgccgaagcactgaagatg
tcgaggtaa
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