Aquifex aeolicus: aq_1939
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Entry
aq_1939 CDS
T00013
Symbol
rpoB
Name
(RefSeq) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
aae
Aquifex aeolicus
Pathway
aae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
aq_1939 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aae03021
]
aq_1939 (rpoB)
03400 DNA repair and recombination proteins [BR:
aae03400
]
aq_1939 (rpoB)
Enzymes [BR:
aae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
aq_1939 (rpoB)
Transcription machinery [BR:
aae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
aq_1939 (rpoB)
DNA repair and recombination proteins [BR:
aae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
aq_1939 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RnfC_N
zf-C4_Topoisom
ApbA_C
MmgE_PrpD_C
Motif
Other DBs
NCBI-GeneID:
1193659
NCBI-ProteinID:
NP_214331
UniProt:
O67762
LinkDB
All DBs
Position
1361772..1366178
Genome browser
AA seq
1468 aa
AA seq
DB search
MAKIALPRKFFGRRFEVLEPPYLLSIPKNSFENFVQLKVNPYKRKNVGLEHIFRTSFPFK
DPDENFILEYLGYEIGDWECNRCGYKPKDDLLGGWDVDCPQCGAKLVYKEKFTPEECKLK
GLTYSAPLRVMLQLKAKTKNGYREFPPKKVYFGEIPLMTETGSFIINGTERIIINQLIRS
SGVFFDEKEEKQKDATITRILYRGSIIPDKGSRVEFELSGATDLISARIDRKKLSATAVL
RAFGLETAYDILKYFYEDVRKFIVKDKYLYDAQTGEEFTPEDLEHHYIFAIIKFRGKLVG
FASSKERDFIEERYIEEWEDLVRLLDDDRIEVLSVTAVPRDVVIKSPYGKSLIDTLANDT
SPKDVDKRSPVKVPAEYTLRDYGLMEMYKRLRHIEAITMEIDSVIERARIFFNVFFRDLK
RYDLSRVGRVKINAKVHRIPKVLKPADVDLLDQLPPLALAEDYGEYKAGTRVTKDLLKEL
FKQYKEIKVKDYTEDEARFILPIDLVNILKYLIDLRHGRVKKDDIAHLGNRRVRSVGELL
ENQARLGIAKMEKVFRDRSAVINPEQPDLKPQDFINPRYVTTAITDFLKTGQLSQYLDNT
NPLSELTHKRRLSALGPGGLTRESAKFEIRDVHPSHYGRICPIETPEGQNIGLVTSPTVY
ARVNEYGFLITPYRKVENGKVTDKIEWLAAYEEENYVIAQSTPTDEEGRLKAEFILARHK
NDIRLVKPEQVEYIDVSPRQVISPSSSLIPFLEHDDANRALMGSNMQRQAVPLIFTQAPL
IGTGMEKKIARDSHAVVVAKRGGVVEEVDSSKIIIRVNPEEINFDDPLDIGIDIYELRKF
QRTNQKTCVNQRPIVRKGEKVEKGQIIADGHSTDRGELALGKDVLVAFMPWRGYNFEDAI
VISERLVKEDVYTSIHIEELEVEARETKVGEEEITRQIPGVPERALAHLDEHGIVRVGTY
VKPGDILVGKVTPKGETRLTPEEKLLQAIFGEKTRDVKDASLRCPPGVEGIVIDVQVFTR
KGTGKKDMLAEKVEREELEALEQELEKKKNLIITGRDKVLKGLVLGRKVEKDAKVGRKTV
KKGTVIDEKVFEEFVNYILGRPENFFEDEDLIRKIREIAERTRTQIEMLNKVYEEKKETL
LKRRDLPPGVITLVKVFIANKRKIKVGDKMAGRHGNKGVISVVLPVEDMPFLPDGTPVDI
VLNPLGVPSRMNVGQILETHLGWAAKELGKKIGEMIEKGRDRKAITEYLKEIFAIGDKDG
ENAKFIEEFLNSLSEEEFWSVVRDYAERGIPMATPAFEGAEEDAIKELLKKAGLPENGKT
TLYDGRTGEPFDFEVTVGYMHMLKLIHMVDDKIHARATGPYSLVTQQPLGGRAQFGGQRL
GEMEVWALEAHGAAYTLQEMLTVKSDDVEGRTKVYEAIVKGKYTYTPGIPESFKVLVREL
KALGLNVKCLNGEEKPCDEVEVKEEEEK
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaattgcgctaccccgtaagtttttcggcagaaggtttgaagtccttgaacct
ccttacttactcagcataccaaaaaactcctttgaaaacttcgtccagttaaaggtaaac
ccttacaaaaggaaaaacgtaggtcttgaacacatattcaggacttcctttccctttaaa
gatcctgacgaaaacttcatactcgaatacctcggttatgaaataggtgattgggaatgt
aatagatgcggatacaaaccaaaagacgaccttctgggaggatgggacgtagactgtccc
cagtgcggagcaaagctcgtttacaaggaaaagttcacaccagaggagtgtaagttaaag
gggctcacttattcggctcccctcagggtaatgctccagctcaaggcaaagactaaaaac
ggctacagggaatttcctccaaagaaggtttacttcggtgaaatccccctaatgaccgaa
accggctctttcatcattaacggaacggaaaggataataatcaaccagctaatacgttcc
agcggtgtcttctttgacgagaaggaagaaaaacaaaaagacgccactataacgaggatt
ctttacaggggaagcataattcccgataaaggttcaagagttgagtttgaactttcaggt
gctacggacctcatatctgcaaggatagacaggaagaagctcagcgccacagcggtgctc
agggctttcggtcttgagaccgcatacgacattctcaagtacttctacgaggacgtaagg
aagttcatagtaaaggacaagtacctttacgacgcacaaacgggagaggagtttacaccc
gaggatttagaacatcattacatctttgcgataatcaagttcagaggaaaacttgtagga
tttgcatcttccaaggaaagggacttcatagaggagaggtacatagaggagtgggaggat
ctcgtaagactccttgacgacgacaggatagaggttctcagtgtaacggcggtaccgagg
gacgtagttataaaaagtccttatggaaagagcctgatagacaccctagcaaacgatacc
tcgcccaaagacgtggacaaaagaagccccgtaaaggttcccgcggaatacaccctgagg
gactacggattaatggaaatgtacaagagactcagacacatcgaagcgatcactatggaa
atagattccgtcatagaaagggcgaggatattcttcaacgtattcttcagggacctaaag
aggtatgacctctcaagagtcggtagggtaaagataaacgccaaagttcacaggataccg
aaggttctgaaacctgcggatgtagatctccttgaccagctcccgcccctagctctcgcg
gaagactatggcgagtacaaggcgggaacgagggttacgaaagatctcttaaaagaactc
ttcaagcaatacaaagaaataaaagttaaggactacacggaagacgaagcgaggtttatc
ctccccatagacctcgtgaatatcctgaagtaccttatagacctcagacacggcagggta
aagaaggacgatatcgcacacctcggaaacagaagagtaaggtccgtaggagaactcctt
gaaaatcaagcgagactcggaattgccaaaatggaaaaggtcttcagggaccgctccgcg
gttataaaccccgaacagccggacctcaaaccgcaggatttcataaacccgaggtacgtc
acaacagctataacggacttcctgaaaaccggacagctctctcagtaccttgacaacaca
aatcccctttctgagctcacccacaagaggagactctcggccctcggtcctggaggactt
acgagggaaagtgcaaaatttgaaataagagacgttcacccctcccactacggaaggatt
tgtcccatagaaacgcccgaaggacagaacataggactggttacctcacccacagtttac
gccagggtcaacgagtacggcttcctcataactccgtacagaaaggttgagaacgggaag
gtaaccgataagattgagtggcttgcggcttatgaagaagaaaattacgtaatagcccag
agcacacccaccgacgaagagggtagactgaaagctgaatttatcctcgccagacacaag
aacgatataagactcgtaaaacctgaacaggttgagtacatagacgtctctcctagacag
gtaatatcaccctcttcttcactcatacccttccttgagcacgacgacgcaaacagggca
ctcatgggttcaaacatgcaaaggcaggcggttcccctcatattcactcaggcgcccctc
atcggaacgggaatggaaaagaagatagcgagagattcccatgcagtagtagttgcaaag
aggggcggtgtggtagaggaagttgacagttccaagataatcatcagggtaaatcccgag
gagataaacttcgacgaccctctggacataggtatagacatatacgaactcaggaagttc
cagagaactaaccagaagacctgtgtaaaccagagacccatagtcaggaaaggagaaaag
gttgaaaaaggacaaatcatagcggacggacactccactgacaggggagagcttgcactc
ggaaaggacgttctcgttgccttcatgccctggagaggttacaacttcgaggacgcaata
gtaatatccgagagactcgtcaaggaagacgtatacacatctatccacatagaggaactg
gaagtagaagcgagagaaacgaaggtaggagaagaagaaataacgaggcaaatacctgga
gttcctgaaagagcactcgctcaccttgatgagcacggaatagtaagggtgggaacttac
gtaaagcccggagacattctcgttggtaaagtcactccaaaaggagaaacgaggctaact
cccgaagaaaagctccttcaggcaatatttggtgaaaagacaagggacgtaaaggacgca
tccctcaggtgtcctcccggagttgagggaatagtaatagacgttcaagtgttcacgagg
aagggaaccggcaaaaaggacatgctagctgagaaagtagaaagggaagaactagaagca
ctggagcaggaacttgaaaagaagaagaacctcatcatcaccggaagggataaggttcta
aaaggacttgtactgggaaggaaggtagaaaaagacgcaaaagtaggaaggaagaccgta
aagaagggaacagttatagacgaaaaagtctttgaagagttcgtaaactacatactcggc
agacccgaaaacttctttgaagacgaagaccttatcagaaagataagggaaatagcggaa
aggacgagaactcaaatagaaatgctcaacaaggtatacgaagagaaaaaggaaacactc
ctcaagagaagggatctcccgcccggagttataacgcttgttaaagtgttcatagcgaac
aagaggaagataaaagtcggtgacaagatggcgggaaggcacggaaacaagggtgttata
tccgtggttcttcccgtagaagacatgcccttcctccccgacggaacgcccgttgatata
gtcctcaaccccctaggtgttccctcacgtatgaacgtaggacaaattctcgagacgcac
ctcggctgggctgcaaaagaactcggaaagaagataggcgagatgattgaaaagggaagg
gacaggaaggctataacagaatacctgaaagaaatattcgcaataggagacaaggacggg
gaaaacgccaagttcatagaggaattcctgaattccttatccgaggaagagttctggagt
gtggtcagggattacgctgaaagaggcattcctatggcaacgcccgccttcgagggtgcc
gaagaagatgcaattaaagaactcctcaagaaagcggggctgcccgaaaacggaaagacc
accctttacgacgggagaacaggagagccctttgactttgaggttaccgtcggttacatg
cacatgctaaagctaatccacatggttgacgacaagatacacgcaagggcaacaggacct
tactccctcgttacgcaacaacccctcggtggtagggcgcagtttggtggacaaaggctt
ggtgaaatggaagtttgggcactcgaagcccacggagccgcttacaccttacaggaaatg
ctcacggttaagtccgacgacgttgaaggaaggacgaaggtttacgaggctatcgttaaa
ggaaagtacacctacacacccggaatacccgagtccttcaaggttctcgtaagagagcta
aaggctcttgggctaaacgttaagtgtctgaatggtgaagagaagccttgtgacgaggtt
gaagttaaagaggaggaagaaaaatga
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integrated database retrieval system
