Aureococcus anophagefferens: AURANDRAFT_52511
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Entry
AURANDRAFT_52511 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03022
Basal transcription factors
aaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AURANDRAFT_52511
09124 Replication and repair
03420 Nucleotide excision repair
AURANDRAFT_52511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaf03021
]
AURANDRAFT_52511
03400 DNA repair and recombination proteins [BR:
aaf03400
]
AURANDRAFT_52511
Transcription machinery [BR:
aaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AURANDRAFT_52511
DNA repair and recombination proteins [BR:
aaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AURANDRAFT_52511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
20222205
NCBI-ProteinID:
XP_009033753
JGI:
Auran1_52511
UniProt:
F0XZP1
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MAAVGDGGDVEVTGRGVDFLLKERHEQVWALVDEYIRAAGDAKGEVVALVLTLAYATPGE
GYAIHELSEAQKAALDVLFALGLVYRRNASSSRFYPTTLGVDVAFGARRSAGGARAGGDF
RRPVDVIVQTNFQVLAYTDAGVNTSTLVLATLNLFAELTTRLPNLVVGTISRDAIKRCVD
RGIRVPQIVKFLRAHAHPAMKASGVPQNVTDQMALWAGEGNRVAFTDGVLVALDSDALYD
AALDAARDLDARVHWKSARKRCLFVDADAEPDLRRRLAAAAAPRKRKAPDN
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcggcgacggaggcgacgtcgaggtcacgggccgcggcgtcgacttcctg
ctcaaggagcgccacgagcaggtctgggccctcgtcgacgagtacatccgcgccgcgggc
gacgccaagggcgaggtcgtcgcgctcgtgctcacgctcgcctacgcgacgcccggcgag
ggctacgcgatccacgagctctcggaggcgcagaaggccgcgctcgacgtcctcttcgcg
ctcggcctcgtctaccggcgcaacgcgagctcgtcgcgcttctacccgacgacgctgggc
gtcgacgtcgccttcggcgcgcggcggtccgcgggcggcgcgcgggccggcggggacttc
cggcggcccgtcgacgtcatcgtccagacgaacttccaggtcctcgcctacacggacgcg
ggcgtcaacacgtcgacgctcgtcctcgcgacgctgaacctcttcgcggagctcacgacg
cggctcccgaatttggtcgtcggcacgatctcgcgcgacgcgatcaagcgctgcgtcgac
cgcggcatccgcgtgccccagatcgtcaagttcctccgggcccacgcgcacccggccatg
aaggcgtcgggcgtcccgcagaacgtcacggaccagatggcgctctgggccggcgagggc
aaccgcgtcgcgttcacggacggcgtcctcgtcgcgctcgactccgacgcgctctacgac
gcggccctcgacgccgcccgcgacctcgacgcccgcgtccactggaagagcgcgcggaag
cgctgcctcttcgtcgacgcggacgcggagccggacctccggcggcgcctcgcggccgcg
gccgcgccgaggaagcgcaaggcgcccgataattga
DBGET
integrated database retrieval system
