Aureococcus anophagefferens: AURANDRAFT_67353
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Entry
AURANDRAFT_67353 CDS
T04134
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
aaf
Aureococcus anophagefferens
Pathway
aaf03013
Nucleocytoplasmic transport
aaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AURANDRAFT_67353
09122 Translation
03013 Nucleocytoplasmic transport
AURANDRAFT_67353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaf03019
]
AURANDRAFT_67353
03041 Spliceosome [BR:
aaf03041
]
AURANDRAFT_67353
Messenger RNA biogenesis [BR:
aaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
AURANDRAFT_67353
Spliceosome [BR:
aaf03041
]
Complex C
Other components
EJC/TREX
AURANDRAFT_67353
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
AURANDRAFT_67353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
20226207
NCBI-ProteinID:
XP_009041045
JGI:
Auran1_67353
UniProt:
F0YKV4
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MWLRNVEMQIFEAVEDSELMAHAQDDTELFQMQQEPKESVAMGPRTRPPKLWLYLASDLH
QDCQEFSMAIWAALDDCVRRAAGEASNGPRIRTAVVEQCGLLDPSDAVEVAARGLLSRAL
EGHDEAYAAELVGVCVAYARYEASHNIRDGTAPRVVLCVPFKLLEDALDASSVSGCGFWW
AQVLLFLAAAWPISEKSAAESEGMLADDYATLIAARLSRSLARSSTNSSGLGMEERRALL
ASVDACCAALENTAPSEDSVTRARDSWLAERLGRVNEDVYGTFTGRLHGIMTMGAKYLTN
SRLLRIQLRDPVLRMQLVTQLYLVFYYLLRESIIGDQPSLGTKSTSKPDWASSAMSRVNH
VLARVRKLVVSTPPNGPERLESLDELIKREANWSTWKKNGCALQSPISRLQNFVFIYLYL
CLCLCLYLYLYLYRAASPGAANFIFHSRQEDYRTDTPKMTKRSGERYTPPTYAVLVKRAK
LKADADSIKNEGTIENCCVKLADAVPSIEEFLRAYEVAQDPENSIEDEYHPKNDKVYCWR
ALRLVVTHHLAWFAEMQKADLDASSYAFHMSVVLHSCRTRDFSGCEEATGKARQDHYTKN
ANGPESIRESMTWHTDLAADNLRASDTPALV
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaggaacgttgaaatgcaaattttcgaggcggttgaagattcggagttaatg
gcccacgcgcaagacgacactgagctctttcagatgcaacaagaaccaaaggaatcggtg
gccatggggccgagaacgagacctccaaagttgtggttatatctcgcttcggacttgcat
caagattgtcaagaattttccatggcgatttgggcggccttggatgattgtgtgcgacga
gcagcgggcgaagcgtcgaacggtcctcgaattcgcacggccgtggtggaacagtgcggt
ctgctggacccaagcgacgcagttgaagtggcagcgcgtgggttgctctcgcgggcctta
gaagggcacgatgaggcttacgcggcggaattggtgggagtctgtgttgcatatgcccga
tacgaggcaagccataatattcgtgatggaacagcgccgcgggtggttctgtgcgtgccc
ttcaagctactagaagacgcgttggatgcctcgagtgtgtcgggctgtgggttctggtgg
gcccaagttctcctattccttgcagcagcttggcctatctctgagaaatcggccgcggag
agcgaaggcatgttggcagacgactacgcaacgcttattgcagcgcggttgtctcgcagt
ctcgcacgctcatcaaccaatagctcaggactaggtatggaggagcgtagagccttatta
gcaagcgtggatgcgtgttgcgccgcactcgagaacacagcaccatctgaagacagtgtc
actcgagcacgcgactcttggctcgctgagcgacttgggcgcgtgaatgaagatgtctat
ggaacgtttacggggcgcctgcatggtattatgaccatgggcgcaaaatacctcacaaat
tcacggctactccggatccagcttcgagatcccgtcctgcggatgcagcttgttacgcag
ctatacttggttttttactatctcctacgtgaaagtattattggcgatcagccttcatta
gggaccaaaagtacaagcaagccagactgggcatcctccgccatgtcccgtgtcaaccat
gtccttgcgcgtgtccgcaagctcgtagtttccaccccaccaaatggcccagagcgcctc
gagtcattggacgaactaatcaagcgggaggcgaattggtcgacttggaagaagaacgga
tgcgctctccaaagtccaatctctcgtttgcaaaatttcgtatttatatatctatatcta
tgtctatgtctatgtctatatctatatctatatctatatcgcgcagcttcgcctggagcc
gctaattttatttttcattctcgacaggaagactatcgcaccgatactccaaagatgaca
aaacgatcaggcgagcgatatactccaccaacatatgcagtacttgttaaacgcgcaaag
ctcaaggccgatgcagatagcatcaaaaatgaaggcacaatcgagaattgttgcgtgaaa
ctggcagatgctgtgccatctatcgaggaatttcttagagcgtacgaagtcgcccaagac
ccagagaacagcattgaagatgagtaccaccccaaaaatgacaaggtctactgctggaga
gcactaaggcttgttgtcacacatcatctcgcctggtttgcagagatgcagaaagccgat
cttgacgcatctagctatgcgtttcacatgagtgttgtactacactcatgcagaacgaga
gattttagtggctgtgaagaagctacaggcaaagcgcgtcaagaccattacaccaaaaat
gcaaacggacctgagtccatcagagagtcgatgacttggcacacagatctagcggcagat
aatcttcgcgcaagtgatacaccagcgttagtgtga
DBGET
integrated database retrieval system
