Anatilimnocola aggregata: ETAA8_68240
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Entry
ETAA8_68240 CDS
T07027
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aagg
Anatilimnocola aggregata
Pathway
aagg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aagg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ETAA8_68240 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aagg03019
]
ETAA8_68240 (deaD)
03009 Ribosome biogenesis [BR:
aagg03009
]
ETAA8_68240 (deaD)
Enzymes [BR:
aagg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ETAA8_68240 (deaD)
Messenger RNA biogenesis [BR:
aagg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ETAA8_68240 (deaD)
Ribosome biogenesis [BR:
aagg03009
]
Prokaryotic type
rRNA helicases
ETAA8_68240 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
P-loop_SecA
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QDU31664
UniProt:
A0A517YN73
LinkDB
All DBs
Position
complement(8607283..8609193)
Genome browser
AA seq
636 aa
AA seq
DB search
MSEFAQDEVEVAEMSPETSQFEAAEELLPEEAGAEDSVPENMFRGLGLNEALVRVLDRSG
YHTPTPIQAQTIPLILEGRDVLGQAQTGTGKTAAFALPVLQRINLAERRPQVLVLTPTRE
LAIQVAEAFEKYAGEMRGLRVVPIYGGQDYQVQLRALDRGVQVIVGTPGRVMDHMRRGSL
KVDGLKTLVLDEADEMLRMGFAEDVEWVLTQLPAERQIALFSATLPEPIRRIAQCHLRNP
AQVTIRQQTATADTIRQRFIVASPHLKEAALARILEAEPIDGVIIFVKMRSTTEPLAEFL
SQHGHRAAALNGDVAQKQRERIVESLRSGKIDIVVATDVAARGLDVQRISHVINYDLPFD
SEAYVHRIGRTGRAGRSGEAILFVHPRDRHMLRNLERATRQAIEPMELPSNRTINKQRVA
RFHDKITAALTHPDIEALASIVDQYRREKEIPLEQIAAALALLANGEKPLLMKDAFKPSE
SFDTHGSSRDSHGGPRHSHDRNSRDRHGDRGPDSRPSRHAGPRGFDEEMETFRVEVGHVN
QVKPGNLVGAIANETGINGSSIGRISIFEDYSTVDLPVGMPSDMFQELKKVRVAGQELNI
SRLAEERRPAAPSAPRAEEKPMKPKKPKRKVAAKPA
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtttgcccaagacgaagttgaagtcgccgagatgtcccccgaaacctcgcag
tttgaagcggctgaagagctgttgcctgaagaggccggtgccgaggattcggttccagaa
aacatgttccgtgggctggggctgaacgaggccctcgttcgcgttctcgatcgttcgggc
tatcacaccccaacgcccattcaagcgcagacgattccgctcattctggaagggcgcgat
gttctgggccaggcacaaacgggcactggcaaaaccgctgccttcgcgttgccggtgtta
caacgaatcaatctggcggaacgccgcccgcaggtgctggtactcactcccacccgcgaa
ttggccattcaggttgccgaagcctttgagaagtatgctggcgaaatgcgcgggctgcgc
gtcgttcccatttacggcggtcaggactatcaggtccaactccgtgcgctcgatcgcggc
gtgcaggtaattgtcggcacccctggccgcgttatggatcacatgcgtcgtggttcgctc
aaggtcgatggactgaagacgctcgtgctcgacgaagctgacgaaatgctgcgcatgggt
tttgccgaagacgtcgaatgggtgctcacgcagttgccggccgagcgtcaaatcgcgctg
ttttcggccacattgccagagccgattcgccgcattgcgcagtgccatttgcgcaacccg
gctcaagttaccattcgccaacagaccgcgactgccgatacgattcgtcaacgctttatc
gttgcctcgcctcatctgaaagaggccgctctcgcccgcattttggaggcggagcccatc
gatggcgtgattattttcgtgaagatgcgcagcaccaccgagccgctggccgagtttctc
tcgcagcacggccatcgtgcagctgcgctcaacggcgacgttgcccagaaacagcgagag
cgaatcgtcgagagtctacgctcgggcaagatcgacattgtggtcgcgaccgatgtcgct
gcccgcggactcgatgtgcagcgcatcagccacgtcattaactacgacctgccgttcgac
agcgaagcctatgtgcatcgcattggtcgcacgggccgagccggccgcagtggtgaagcc
attctgttcgtccatccgcgcgatcgacacatgctccgcaacctcgagcgggccacgcgt
caagcgatcgaaccgatggaactcccctcgaaccgcactatcaacaagcagcgcgttgct
cgctttcacgacaagatcacggcggcactgactcatcccgatatcgaagcactcgcttcc
attgtcgaccagtatcgccgcgaaaaagagattccgctggagcagattgctgccgccctg
gcattgctcgccaatggcgaaaagccattgctcatgaaggatgctttcaagccctccgag
tcgtttgatacgcacggctcctcgcgcgatagccacggcggacctcgccacagccacgat
cgcaacagccgtgatcggcatggagatcggggccccgattcccgcccaagtcgtcacgcc
ggcccgcgcggtttcgacgaagagatggaaaccttccgagttgaagtcggacacgtcaat
caagtgaagccgggcaatctcgtcggtgccattgcgaacgagacaggcatcaacggctcg
agcattggccgcatttcgatcttcgaagactacagcacggtcgacctgcccgtgggcatg
cccagcgacatgtttcaagaattgaagaaggtccgtgtggccggccaggaacttaacatt
tcgcgacttgccgaagagcgccgacccgcagcgccgtccgctcctcgcgccgaggagaaa
ccgatgaagcccaagaagccgaagcgcaaagtggctgccaagccagcttag
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