Arthrobacter agilis: NCTC2676_1_00239
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Entry
NCTC2676_1_00239 CDS
T07056
Symbol
yesX
Name
(GenBank) Rhamnogalacturonan exolyase yesX
KO
K20276
large repetitive protein
Organism
aagi
Arthrobacter agilis
Pathway
aagi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aagi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC2676_1_00239 (yesX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
AGA-YXIM_GBD
fn3
Lipase_GDSL
DUF1521
DUF4992
Motif
Other DBs
NCBI-ProteinID:
VDR30989
LinkDB
All DBs
Position
1:256177..261657
Genome browser
AA seq
1826 aa
AA seq
DB search
MPHPGLQRACLASPLLAGVTILSLALMGAPAVAADPPRTYSFDFGTASSPVEEGWERVAD
STTYAPGASFGIVPVDGAAPVSRYRQAGTPDAVANDFVLGAAWGFVADVPNGTYDVTVLS
GDQLAGTSTTKTSISLEGTPAGVVQARQAVEQQTWRTTVSDGQLTVDVSGPGAGGYVNGI
VITEAPTAPVEPDPDEPESALAAPQDLRVAHVAADGVVLRWNEVAGAAGYIVSRSSSATG
PFEQVAETAAGRDVFVTDPTAETSTPNFYRVQARAADGLSAPSSLTVSNPLDDPPALPDG
GVLTFDLGSGTTAQGSVRLDATSAYSATTRVGFIDPTKVTATDRGGQDATRGDFVTVGDT
ELVVDLPNGDYAVDLIAGDAGGPTDVAITAEQMAKVQPTTKATGEFLEMSFDIAVVDGQL
NLDFAGTAPNLNALVLTRQGERTEGAEPTMWITGDSTVQTYTSDYAPQAGWGQMVDRFLD
DGVTVENKAIGGRSSKNFISQGRLDEVLRTIRPGDYLFVQFGHNDNSYGVDDRFAAPADY
YEYLRTYVDGARQRGATPVLVTPVSRRSFDAATGEANVSFPAYVDAVKALAEETGTPVVD
LSASSRAYLTGIGAEAAKSVFLHVPAGVYANRPTGTADDTHFQDYGAIQMARLVATDVAA
LDIPLADNVAAVEPPAAVPAAPAGVVASNISNAGAQLTWQAVDGADIYKISVKKASDADD
AYALVTTSTLPQAAVSGLTEGESYDLRVVAVNGRGDSAPSAAVRVTTKAPLYSFDVQLAG
NPVMPGYTEVNQNSTYDADRGWGFLDVSGLGGRDRGVGFDPAPTDLERDFLLPTTTHEFA
VDVPNGSYAVKTYNGDWIGTSRSTIQLEGKNFGDSNAGRASVSQKVSQPVQVTDGQLNLV
LTGSSSRLNGIEITPLILAPSGLVLDDLTIDGSAVTVDLGWEPTEGAAGYRVYRASAGNA
PVAVGDTDAPDFRDTTADVGLAYTYTVVALDAAGTESVASNPLELTTVDPDVPVAPVPTG
LALGAVNKNDVTITWTPSNGALFYQVYRAEPTADGSLGDLELVGRADGATFTDTDVLTTI
EYTYAVTAVNAGGTSDRSSTITSPAATTLQRQAERLDRAPVAVQGAYGVYVGWRMLGLDD
DAIAFHVYRDGERITSEPVTDSTNLLDADGSGDVTYRVSSIVDGVERWATEDFTVWGQQY
LDVPLDKPADAVTKDGQPYSYKAGDASVGDVDGDGEYEIILKWDPTNSRDNSQAGYTGTV
YVDAYKLDGTRLWRIDLGKNIRAGAHYTQFQVFDLDGNGKAEVTMKTADGTVDGAGTVIG
SATADYRNSAGYVLSGPEFLTVFDGETGAAIDTIDYVPARGDVGSWGDTYGNRVDRFLAG
VAYLDGEKPSVVFSRGYYTRAVIAAFDFDGTDLTSRWTFDSDVSGDEYRSQGNHQFSVAD
VDGDQKDEIVFGSMTIDDDGDALYTTGLGHGDALHVSDFDPSRPGLEVFAAHEDMGSSGN
LGATFRDAATGEILWSIPATRDTGRTTMADIDPNHPGAEGWAIGGDASYNSPVGQLRSAK
GELLSEKIPAANFVTWWDADLLREITDNDYDTEIAAGVPTISKWNPETQEAEEIYRAEGT
LSNNTTKANPALQADLFGDWREEIVTRTEDSSALRIATTVDLTEHRLRTLQSDSTYRLGV
AGQNTSYNQPPHTSYFLGMDMQAPPAPSIAYTGEDRGQGDLVNKEPSFVPEPAGAKELKQ
STRIDLGLAGEKYGRGANEVVLENLEPGSWFYVYLDSTGLGWRQASAAGEVTVTTPEDTR
PGNNKIVVFTGDGELLGWEALRVTGP
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atgccacatcccggtcttcagcgcgcctgtttggcgtctccactcctcgccggcgtcacc
atcctcagcctggcgctcatgggcgctccggccgtcgccgccgatccgccccgtacctac
tccttcgatttcggcaccgcctcgagccctgtggaggaggggtgggaacgggttgcagac
tccaccacctacgcgccgggtgccagtttcggcatcgtcccggtcgacggcgccgccccc
gtctcccggtaccgccaggcaggaacgccggacgccgtcgccaacgacttcgtcctcggc
gccgcctggggattcgtggcggatgtgcctaatggcacgtacgacgtgacggtgctctcc
ggggatcagctcgccgggaccagcaccaccaagacctcgatctccctcgagggcacgccc
gccggtgtggtgcaggcccggcaggccgtggagcagcagacctggcgcaccacggtcagt
gacgggcagttgacggtggacgtctccggaccgggggccggcggttatgtcaacgggatc
gtcatcacggaagctccgaccgcacccgtcgagcccgaccccgacgaacccgagtccgcc
ctcgcggccccgcaggatctgcgcgtcgctcacgtcgcagcggacggcgtcgtcctccgc
tggaacgaggtggccggtgccgcgggctacatcgtctcccgctcctcctccgcaaccggg
ccgttcgagcaggtggccgagacggctgcagggcgcgacgtcttcgtcaccgacccgacg
gccgagacctccacccccaacttctaccgcgtccaggcccgggccgcggacggcctctcg
gcgccgtcgagcctgacggtctcgaaccccctcgacgacccgcccgccctgcccgacggc
ggcgtcctgaccttcgatctcggcagtggcacgacggcgcaggggtcggtccggctcgat
gccacctccgcctattcggcgacgacgagggtcgggttcatcgacccgacgaaggtcacg
gcaaccgaccgcggcggccaggatgccacccgaggcgacttcgtgaccgtcggcgacacc
gaactcgtcgtcgacctcccgaacggcgactacgcggtggacctgatcgccggtgacgcg
ggcggccccaccgacgtcgccatcaccgccgagcagatggcgaaggtccagcccaccacg
aaggccaccggcgaattcctcgagatgtccttcgacatcgccgtcgtggacggccagttg
aacctggacttcgcgggtaccgcgcccaacctgaacgccctcgtgctcacgcgccagggg
gagcggaccgagggtgccgagccgacgatgtggatcacgggcgactccaccgtccagacc
tacaccagcgactacgctccgcaggcgggctggggtcagatggtcgaccgtttcctggac
gacggcgtgaccgtcgagaacaaggcgatcggcgggcgcagctcgaagaacttcatcagc
cagggccgtctcgacgaggtgctccgcaccatccgtcccggcgactatctgttcgtgcag
ttcggccacaacgacaacagctacggcgtggacgaccggttcgcggccccggccgactac
tacgagtacctgcgcacctatgtggacggcgcgcgccagcgcggagccaccccggtcctc
gtgactccggtctcgcgccgttccttcgacgccgcgacgggagaggcgaatgtctccttc
cccgcctacgtggatgccgtgaaggcgctcgcggaagagaccggcacgcccgtcgtggat
ctctccgcctccagccgcgcctacctgaccgggatcggcgccgaggccgcgaagtccgtc
ttcctccacgtcccggccggggtgtatgcgaaccgccccaccggcaccgccgatgacacg
cacttccaggactacggcgccatccagatggcccgcctcgtggctaccgacgtcgccgcc
ctggacatcccgctcgcggacaacgtggccgccgtcgagccgcccgcagcggttcccgcg
gcacccgcgggcgtcgtcgcgagcaacatctccaacgcgggagcgcagctcacgtggcag
gccgtggacggtgcggacatctacaagatcagcgtcaagaaggcgtccgacgccgacgac
gcctacgcgctggtcacgacgtcgacgctcccgcaggccgctgtcagcggtctgaccgag
ggggagtcctacgatcttcgggtcgtcgcggtcaacggacgcggcgattccgcgccgtcc
gcagccgtcagggtcaccaccaaggcgccgctctactcgttcgacgtgcagctcgccggc
aatcccgtgatgccgggctacaccgaggtgaaccagaacagcacgtacgacgccgaccgc
gggtggggcttcctcgacgtctccggactgggcggccgcgaccggggcgtcggcttcgac
ccggcgccgaccgacctggagcgcgacttcctgctcccgacgacgacccacgagttcgcg
gtggacgtcccgaacggttcctacgccgtgaagacctacaacggcgactggatcggtacc
agccgctccaccatccagctcgagggcaagaacttcggcgactcgaacgcgggccgcgcc
tcggtctcgcagaaggtcagccagccggtacaggtcacggacgggcagctgaacctcgtg
ctcaccgggtcgtcgtcccgtctcaacggcatcgagatcacgccgctgatcctggcgccg
tccgggctggtgctcgacgatctcaccatcgacgggtccgccgtcaccgtcgacctcggc
tgggaacccaccgagggtgctgcgggttaccgcgtgtaccgcgcgtcggccgggaacgcc
ccggtcgccgtcggtgacaccgacgcccccgatttcagggacaccacggccgacgtcggc
ctggcgtacacctacaccgtggtggcgctcgacgcggccggcacggaatccgtcgcgtcg
aacccgctcgaactgaccacggttgatccggacgtcccggtggcgcccgtgccgaccggt
ctggccctcggcgccgtcaacaagaacgacgtgaccatcacctggacgccgtcgaacggc
gccctgttctaccaggtgtaccgggccgagccgacggcggacgggtcgctcggcgacctc
gagctcgtgggccgcgcggacggggcgacgttcaccgacacggacgtgctgacgaccatc
gagtacacgtacgcggtgaccgcggtgaacgcgggcggcacgtccgatcggtcctccacc
atcacctccccggccgcgaccaccctgcagcgccaggccgagcggctcgaccgcgcaccc
gtcgccgtgcagggcgcgtacggcgtgtacgtgggctggcgcatgctcgggctcgacgac
gacgccatcgcgttccacgtctaccgcgacggcgaacggatcaccagtgagcccgtcacc
gacagcacgaacctgctcgacgcggacggctccggcgatgtcacctaccgggtcagctcc
atcgtggacggcgtcgaacgctgggccacggaggacttcaccgtgtggggccagcagtac
ctcgacgtacccctcgacaagccggccgacgccgtcaccaaggacgggcagccctactcc
tacaaggcgggcgacgcctccgtgggtgacgtcgacggcgacggcgagtacgagatcatc
ctcaagtgggacccgaccaacagccgcgacaactcgcaggccggctacacgggcaccgtc
tacgtcgacgcctacaagctcgacggcacgcggctgtggcggatcgacctcgggaagaac
atccgggccggcgcgcactacacgcagttccaggtgttcgacctcgacggcaacggcaag
gccgaagtgaccatgaagaccgccgacggcaccgtcgacggcgcgggcacggtgatcggc
agtgccaccgccgactaccgcaactccgccggctacgtcctcagcggtcccgaattcctg
accgtgttcgacggtgagaccggtgccgcgatcgacacgatcgactacgtgcccgcccgg
ggcgacgtcggctcctggggcgacacctacggcaaccgggtggaccgcttcctggcgggc
gtggcgtacctggacggcgagaagccgagcgtggtgttcagccgcggctactacacccgg
gcggtcatcgccgccttcgacttcgacggcacggacctcacctcacggtggacgttcgac
tccgatgtctccggtgacgagtaccgcagccagggcaaccaccagttctccgtcgcggat
gtcgacggcgaccagaaggacgagatcgtcttcgggtccatgaccatcgacgacgacggc
gacgcgctgtacaccacgggcctcggccacggtgacgccctgcacgtctcggacttcgat
ccgtcacggccgggactggaggtcttcgctgcgcacgaggacatgggctcctcgggcaac
ctgggcgctaccttccgggacgccgcgacgggcgagatcctctggtccatcccggcgacc
cgcgacaccggccggaccacgatggcggacatcgatcccaaccatccgggggccgagggc
tgggcgatcggcggggacgcgtcctacaactcgcccgtggggcagctgaggtccgcgaag
ggtgaactgctctcggagaagattccggccgccaacttcgtcacctggtgggacgccgac
ctcctccgcgagatcacggacaacgactacgacaccgagatcgccgcgggagtgccgacc
atctcgaagtggaaccccgagacccaggaggccgaggagatctatcgggcggaagggacg
ctgagcaacaacaccacgaaggcgaatcccgccctccaggcggacctgttcggtgactgg
cgcgaggagatcgtgacgcggaccgaggactcctcggcgctgcggatcgcgacgacagtc
gacctgaccgagcaccggctgcgcaccctgcagtcggattccacctaccggctgggtgtg
gccgggcagaacacctcctacaaccagccgccgcacacctcctacttcctcggcatggac
atgcaggcacctcccgcgccgagcatcgcctacacgggcgaggatcgtgggcagggcgac
ctggtgaataaggagccgtccttcgtcccggaacccgcgggggcgaaggagctcaagcag
tcgacgcgcatcgatctcggcctggccggcgagaaatacgggcgcggtgccaacgaggtc
gtgctggagaacctcgagccgggcagctggttctacgtgtacctcgacagcacgggcctc
ggctggcgccaggcatccgctgccggtgaggtcacggtgaccacaccggaggacacgcgc
ccggggaacaacaagatcgtcgtcttcacgggcgacggcgagctcctcggatgggaggcc
ctccgggtcaccggcccctga
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