Aeromonas hydrophila MX16A: BOQ57_15605
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Entry
BOQ57_15605 CDS
T04629
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
aaj
Aeromonas hydrophila MX16A
Brite
KEGG Orthology (KO) [BR:
aaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaj03400
]
BOQ57_15605
DNA repair and recombination proteins [BR:
aaj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BOQ57_15605
Archaeal homologous recombinant proteins
BOQ57_15605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
Jnk-SapK_ap_N
ABC_tran
ABC_ATPase
AAA_21
MMR_HSR1
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APJ16265
LinkDB
All DBs
Position
complement(3409589..3413344)
Genome browser
AA seq
1251 aa
AA seq
DB search
MKILSLSGENLASLTGQFTIDFAGGALGAAGLFAITGNTGAGKSTLLDAICLALYDEMPR
FIANRKNVAEVGRMDDEEKLKANDVRGILSRGHASGFAEVQFRGCDGRIWLARWAVRRAR
NRAEGRFQAQERSLTDVASGQVFSGSKRELQDRIDELVGLSWEQFRRAVILPQGEFAAFL
KSSADERSALLERMTGTELYSAISIQTHERAREEQQKLAAISQRLGDVALMDEATREQWV
SQQVSLATSLKHEQQQQQLMQDLRDLNGRIAAQLQACQEGEAALAAAEVAHAAAAPEREE
FARAEQAQVARADHDELARLTLEVQQQEKALAELGPELGKLEEQTQQSALTEQQLLAEKI
AAEREWGALQPELKRAQELDTRIREKQQQLQKIQQEGAQEREVQLTLEQGWRQQRQQVEQ
LKAQHQQWGAWLEEHKELAPVARQWQPLLTAMQDWAEDADRLQQLLTLREHKLRALRQLQ
HQLEQGQQERDYWQREQARLQQQQHELQEQQWEGRLAKAQEQWQGQTEQLGQLRQLLELA
DYGRNHGEQHGRLQQEIAQLEQALGKLAILGDELTPARERLALQRDEARHALEQSRAIAS
FEQHRHILRDGEPCPLCGAEEHPYHQSQPQVAGILGQLAERVRSLELEWERLNHQYIQCE
SERQELARQLAVRQQHLPELETRAEQLTQRWQQLGGAELLGHPLPLRQSPIEWNELMSTL
LGRGQSLEQGLARSQQQLREAQLGQQQLQAVRQQLSQLASQHQQFEQQWQEADRQRIALE
GEVKAMGEQETTLRQRLEQGGSRLDEQMGGQPWRQWLGSQQWHEWQRACEAWLHGQSEWE
RLTGEIASLTPALSAQEARLQTQRELLHKLERDYKEHEQQRQGLVTSRATCLGGEVIAQV
EIRWQQRLQQLASELETMQGAARALRERQTELKTRLSHLEQEKQVSSRRRREVLGRWAAH
ASSLGIAEYDLRRLLAMSPDELKGRRAALQALEDARAEARTRLTERQRALALEESKRDRY
REHHPELAALAPQELDSRLTALEAHCRALDEQLFQCKSTLAQAEAAALKAGTLQEELAAQ
QAVADHWQRLSDLIGSASGAKLRTFAQSLTLERLLLEANAQLAELSPRYRLERVPGTDLA
LQVVDLDMGDEVRSVDSLSGGESFLVSLALALALSSLSSRQTQVESLFIDEGFGTLDPDS
LDLALSSLDSLQAAGRQIGVISHVQTLVERIGVQVRVEALGGGESRVVLPG
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttgtcgctgtcaggggagaatctggccagcctgaccggtcaattcaccatc
gattttgccggtggtgccctgggggccgccggcctgtttgccatcaccggcaataccggt
gctggcaagagcaccctgctcgatgccatctgtctggcgctctacgacgagatgccgcgc
tttatcgccaaccgcaagaacgtcgccgaagtgggccgcatggatgacgaggagaagctc
aaggccaacgacgtgcgcggcatcctcagccgcggccacgccagcggtttcgccgaggtg
cagtttcgcggctgtgacggccgcatctggctggcccgctgggcggtgcgccgggcccgc
aaccgcgccgaggggcgctttcaggcccaggagcgcagcctgaccgacgtggcgtcgggc
caggtgttcagtggcagcaagcgggagctgcaggatcgcatcgacgagctggtggggctc
tcttgggagcagtttcgccgcgccgtcatcctgccgcagggggagtttgccgccttcctc
aaatcgagcgccgacgagcgttcggccctgctcgaacggatgaccggcaccgagctttac
tccgccatttcgattcagacccatgagcgggcgcgggaggagcagcagaaactcgccgcc
atcagccagcggctcggcgacgtggcactgatggacgaggcgacccgcgagcagtgggtg
agccagcaggtcagcctcgccaccagcctcaagcacgagcagcaacaacagcagctgatg
caggacttgcgcgatctcaacggccgtatcgccgcccagttgcaggcctgtcaggaggga
gaggcggcccttgccgcggccgaggtggcccacgctgcggccgctcccgagcgcgaggag
ttcgcccgcgccgagcaggcccaggtggcccgcgccgatcacgacgagctggcccgcctc
accctggaggtgcagcagcaggagaaggcgctggctgagcttggccccgaacttggcaag
ctggaggagcagacccagcagagcgccctcaccgaacagcaactgctggcggagaagatc
gccgccgagcgcgagtggggcgccctgcagcccgagctcaagcgggcgcaggagctcgac
acccgcattcgggaaaagcagcagcaattgcagaagatccagcaggagggggcgcaggag
cgggaggtgcagctcactctggagcagggctggcgccagcagcgccagcaggtggagcag
ctcaaggcccagcatcagcaatggggcgcctggcttgaggaacacaaggagctggcgccg
gtggctcgccagtggcaacccctgctcaccgccatgcaggattgggccgaggatgctgac
aggctgcagcagctccttaccctgcgcgaacacaagctgcgcgccctcaggcagttgcag
caccagctggagcaggggcagcaggagcgcgactactggcagcgcgagcaggcgcggctg
cagcagcaacagcacgagctgcaggagcagcagtgggaggggcgtctggccaaggcgcag
gagcagtggcaagggcagaccgagcagctgggccagctgcgccagctgctggagctggcg
gactatggccgcaatcacggcgagcagcatggtcgcctgcagcaggagatcgcccagctg
gagcaggcgctcggcaagctggccatcctcggcgacgagctgacgccagcccgcgagcgg
ctcgccctgcaacgggacgaggcgcgccacgcgctggagcagtcccgcgccatcgccagt
tttgagcagcatcgccacattttgcgtgacggtgaaccttgcccgctctgcggcgccgag
gagcacccctatcaccagagccagccacaggtggcgggcattttgggccagctggcggag
cgcgtccgcagcctggagcttgagtgggagcggctcaatcaccaatacattcagtgcgag
agcgagcgccaggagctggcccgccagctggcggtgcgccaacaacatctgcctgagctg
gagacgcgcgccgagcagctgacccagcgctggcagcagctgggcggtgccgaactgctg
ggccatccgttgccgctgcgtcagagcccgatcgagtggaacgaattgatgagtaccctg
ctcggccgcggccagagcctggagcaggggctggctaggagccagcagcaactgcgcgag
gcccagctcggccagcagcagttgcaggccgtgcgccagcagttgagccagctggccagc
cagcaccagcagttcgagcagcagtggcaggaggccgaccgccagcgcatcgccctggaa
ggggaggtgaaggcgatgggcgagcaggaaacgaccctgcgccagcgccttgagcagggg
ggcagccggctcgacgagcagatgggaggccagccctggcgtcagtggctgggcagccag
cagtggcacgagtggcagcgggcctgcgaggcctggctgcacggccagagcgagtgggag
cggctgaccggcgagattgccagcctcaccccggccctgagcgcccaggaggcgcgcctg
cagacccagcgcgagctgctgcacaagctcgagcgcgactacaaggagcatgaacagcaa
cggcaggggctggtcaccagccgcgccacctgtctggggggcgaggtaattgcccaggtc
gagatccgctggcagcagcggctgcagcagctggccagcgagctggagacgatgcaggga
gcggcccgcgccttgcgcgagcgccagaccgagctcaagacccgtctcagccatctggag
caggagaagcaggtgagcagccggcggcgacgggaggtgctggggcgctgggctgcccac
gccagcagcctcggcatcgccgaatatgacctgcgccgcctgctggccatgagcccggat
gagctcaaggggcgccgcgccgccttgcaggcgctggaggatgcccgcgccgaggcgcgt
acccgtttgaccgagcggcagcgggcgctggcgctggaggagagcaagcgggatcgttac
cgcgagcatcaccccgagctggccgcgttggcgccacaggagctcgacagccggctgacg
gcgctggaggcgcactgccgcgccctcgacgagcagctgttccagtgcaagagcacgctg
gcccaggcagaggcggcggcccttaaagcgggcaccttgcaggaggaactggctgcccag
caggcggtggcggatcactggcagcgcctctccgaccttatcggctcggccagcggcgcc
aagctgcgtaccttcgcccagagcctcacgctggaacggctgctgctggaggccaacgcc
cagcttgccgagctctccccccgctatcggctggagcgagtgcccggcaccgatctggcg
ctgcaggtggtggatctcgatatgggggatgaggtgcgctcggtggattccctctccggc
ggcgagagctttctggtgtcgctggcgctggcgctggccctctccagcctgtcgtcgcgc
cagacccaggtcgaatcgctctttatcgatgaaggcttcggcaccctggatcccgacagc
ctggatctggcgctctccagccttgactccctgcaggcggccggccgccagatcggggtc
atctcccacgtgcagaccctggtggagcggatcggcgtgcaggtgcgggtggaggccctc
ggcggcggtgaaagccgggtggtgttgcccggatga
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