Anopheles albimanus: 118465272
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Entry
118465272 CDS
T08930
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
aali
Anopheles albimanus
Pathway
aali03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aali00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118465272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aali03041
]
118465272
Enzymes [BR:
aali01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118465272
Spliceosome [BR:
aali03041
]
Complex C
Other components
Step II factors
118465272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
Flavi_DEAD
T2SSE
ResIII
nSTAND3
AAA_30
AAA_14
ATPase
AAA_16
AAA_23
ABC_tran
Motif
Other DBs
NCBI-GeneID:
118465272
NCBI-ProteinID:
XP_035789197
LinkDB
All DBs
Position
3:27392821..27396661
Genome browser
AA seq
1133 aa
AA seq
DB search
MERFKATERLRASSPEKGGLVLRKEKRDDDTFKKPKHSLLGLDRQAAARRAERAAAVRPS
FYEEDEDDGGRRDRRTPKRRDGEDDDDRERSRKYRKRASETPSYGGGVSDFARRRLEEKE
ARQQRDHRRSSGGLYASTSKGRSPKRYKESSRSVSESRRSTFSRYEPSTPRGDRRGVKTN
ASSSWTDDEDDDEGGGGGGKRMSSWDYPTPKPFQGTTELTEADRERWREEQLRLDREWYG
SDDERQMNEYSELNSEYLQKREQQQQQSRTNRRISAQQRQINKDNELWEKNRLLTSGVVM
SVNVSEDYDEEALERVNLLVHNTVPPFLDGRIVFTKQPEPVIPVREPTSDMAINARKGSA
LVRTFRELKERKRAQMKHWQLGGTKLGNIMGVAKENDPQDDRVDDESYDSRKDQKYADHI
GGDSAPGGDAEFASRKRNIQQQRRSLPVFAVRQDLLNIIRENSIIIIVGETGSGKTTQLT
QYLHEDGYSRHGMIGCTQPRRVAAMSVAKRVSDEMAKPLGQEVGYAIRFEDCTSDATVIK
YMTDGILLRESLRDKDLDGYSVIIMDEAHERSLSTDVLFGLLREIVARRRDLKLIVTSAT
MDAGKFSTFFGNVPTFTIPGRTFPVDVFYAKTVCEDYVDGAVKQVLQIHLQPTEGDILVF
MPGQEDIEVTCEVLAERLGEIDNAPALSILPIYSQLPSDLQAKIFHRSADGTRKCVVATN
IAETSLTVDGISYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAF
RLYTERQYKDELLHLTVPEIQRTNLANTVLLLKSLGVADLLQFHFMDPPPQDNILNSLYQ
LWILGALDHTGALTPLGRQMAEFPLDPPQCQMLIVANDMGCSEEILIIVSMLSVPSIFYR
PKGREEEADGVREKFQVPESDHLTYLNVYQQWKMNKYSASWCNEHFIHVKAMRKVREVRQ
QLKDIYSQQQRLKLNSCGTDWDVVRKCICSAYFYQAARLKGIGEYVNLRTGMPCHLHPTS
ALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGHWLAELGPMFFSVKETGKSNRDKRRQA
VEHQNAMEVQMREAQQQMEQRRLDEETKQLLGIKQEIVTPGATPRRTPARIGL
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggagcgctttaaagcaaccgagcggttgagggcatcatcaccggagaaaggtggtcta
gttttgcgtaaagagaagcgagacgacgacacgttcaagaagcctaaacactcgctgctt
ggcctcgatcggcaagcggcagcccgccgtgcggagcgggcagccgccgttcgaccgtca
ttttatgaggaagacgaagatgacggtggccgtcgggaccgccgtacaccgaagcgacga
gacggtgaagatgacgatgatcgtgaacgttcccgaaagtaccgtaaacgcgcatcggag
acaccctcgtatggcggtggtgtcagcgattttgcacgtcgccggctggaagagaaggaa
gcacggcagcagcgtgaccaccgtcgtagcagtgggggtctgtacgcctctacttcaaag
ggacgctcaccgaaacgctacaaagagtcatcccgatctgtctcggaatctaggagaagt
acattctcacgctatgaacctagtacaccgaggggtgaccgccgaggggtgaaaacgaat
gccagttccagttggacagatgatgaggacgacgacgaaggtggtggtggtggtggtaaa
cggatgtcatcgtgggattaccccacaccgaagccattccagggcacgacagagttaacc
gaagcggatcgggaacgttggcgcgaagagcagctgcgtctggatcgtgaatggtacggc
agtgacgatgagcgccagatgaacgaatactccgagctcaactcggagtatctgcagaag
cgcgagcagcaacagcagcaatctcgtaccaatcgacgcatctcggcccaacagcgccaa
atcaacaaggacaacgagctgtgggagaagaaccggctgcttacctccggcgtcgtaatg
tcggtaaacgtgagcgaagactacgacgaggaagcgctcgagcgggtgaacctgctcgta
cacaacaccgtgccaccgtttctcgatggacggatcgtgttcacgaagcaaccggaaccg
gtcatacccgtgcgcgaaccgacgagcgatatggctatcaacgctcgcaagggtagcgcc
ctggttcgcacgttccgggagctgaaggagcgtaagcgggcccagatgaaacactggcag
ctcggcggcaccaagctgggcaacattatgggtgtcgcgaaggaaaacgatccacaggat
gaccgggttgatgatgagtcgtacgattcgcgtaaagatcaaaaatacgctgaccatatc
ggcggtgacagtgcaccgggtggtgatgcggagtttgcctcccgtaaaagaaacatccag
cagcagcgccgatcgttgcccgtgttcgcggtacgtcaggatttgttgaacatcattcgt
gaaaactcgatcataattatcgtgggtgagacgggcagcggtaagacgacccagctgacg
cagtatttgcacgaagatggctatagccggcacggtatgatcgggtgtacccagcctcgt
cgtgtcgctgccatgtcggtggccaagcgtgtctcggatgagatggcgaaaccgctcggc
caggaagttggctatgcgatccgtttcgaggactgtacgagcgatgcgacggtcatcaag
tacatgaccgatggtatactgttgcgcgagagcctgcgggacaaagatctggatgggtat
agtgtgatcatcatggacgaagcgcacgagcgatcgctctccacggatgtgctgtttggt
ttactgcgtgaaatcgttgcccggcgacgggatctgaaactgatcgttacctcggcgacg
atggatgcgggcaaattttcgaccttcttcggaaacgtgccaacattcacgatccccgga
cggaccttccccgtggatgtgttttacgcgaagaccgtttgcgaggattatgtcgatggt
gcagtgaagcaggtgcttcagatacatctgcagccaacggagggcgatatactggtgttt
atgcccggtcaggaagacatcgaggtgacgtgcgaggtactggcggaacggttgggcgaa
atcgacaatgcaccagccctctccattctgccgatctactcgcagctaccgtccgatctg
caggccaagattttccaccgttcggcggacggaacacgcaagtgtgtggtggccacgaac
attgccgaaacgtcgctaaccgtagacggcatctcgtacgtgatcgattccgggtactgt
aaactgaaggtctacaatccgcgcatcggtatggacgcgctgcagatctatccgatctcg
caagcaaacgccaaccaacgttccggtcgtgccggtcgtacgggaccgggtcaagcgttc
cggctctataccgagcggcagtataaggatgagctgctgcacctgacggtaccggaaata
cagcgtaccaatttggccaacacggtgctgttgctgaaatcgctcggtgttgccgatctt
ctgcagttccacttcatggatccgcctcctcaggacaacattctgaattcgctgtaccag
ctgtggattctgggagcgctcgatcacaccggtgcgctgactccgctcgggcgacagatg
gctgaattcccgctcgatcctccccagtgtcagatgctgatcgtggccaacgatatgggc
tgcagcgaggagatcttgatcattgtgtcaatgctatcggttccctcgatcttctatcgg
ccaaagggtcgtgaagaggaagcggatggtgtccgtgaaaagtttcaagtgcccgaatcg
gaccatctaacctatctgaatgtttaccagcagtggaagatgaacaaatactccgcgtcg
tggtgcaacgagcactttattcacgtgaaagcgatgcgcaaggtacgtgaggtgcgccaa
cagctgaaggacatttacagtcagcagcagcgcctgaagctgaactcttgcggaaccgat
tgggatgtggtgcggaagtgcatttgttccgcgtacttctaccaagctgcccgtctcaag
ggtattggcgagtacgtgaacctgcgtaccggtatgccgtgccatttgcaccctacctcg
gcgctgtacggacttggtaccacaccggattacgtcgtgtaccatgagctgatcatgacg
gccaaggagtacatgcaatgtgcgacagctgtcgatgggcactggttggccgagctggga
ccgatgttcttctcggtgaaggaaaccggcaagagcaaccgggacaagcgtcgccaggcc
gtcgagcatcagaacgccatggaggtgcagatgcgcgaggcacagcaacagatggagcag
cgtcggttagacgaggagacgaagcagctgttgggcatcaagcaggagattgttacacca
ggtgcaacaccccgtcgcaccccggcacgcattgggctgtaa
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integrated database retrieval system
