Abyssibius alkaniclasticus: LGT41_0015785
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Entry
LGT41_0015785 CDS
T08825
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
aalk
Abyssibius alkaniclasticus
Brite
KEGG Orthology (KO) [BR:
aalk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aalk03400
]
LGT41_0015785
DNA repair and recombination proteins [BR:
aalk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
LGT41_0015785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
UPF0547
SWI2_SNF2
zf-ribbon_3
zinc_ribbon_2
DZR
AAA_16
zf-tcix
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
UPH71219
LinkDB
All DBs
Position
complement(3184635..3186374)
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AA seq
579 aa
AA seq
DB search
MLTLRPYQQAAIASIYGYFEKESGNPLVVIPTAGGKSLVMAAFIDGVLKAWPDQRVLVVT
HVRELIAQNHAEMLGLWREAPAGIYSAGLGRRDARARILFAGIQSIHDKATRIGHADLVL
IDEAHLIPGRSNTMYRRFLNDLQAINPALKVIGLTATPFRLDSGMLHEGENALFTDIAYE
VSVRDLIDQGYLSPLISKQTKTRLDVTGVGSRGGEFIARDLEDAVDQDAITRAAVAEVIA
HGETRRSWLAFCSGVRHATHVAEEFRRRGVSCATIFGKTPKDERDAIIAAFKRGEIRALA
SMGVLTTGFNAPAVDLIAMLRPTKSAGLYVQMAGRGTRLAEGKENCLVLDFAGNVRRHGP
IDLVRPKRPGGPGDGPPPTKICPKCGTIVAIAALECPDCGFEFPGREVKLEPTASTLEVL
STGKPQWVGVTDVTYSRREKRGGRVSLKVTYRCGLAFHTEWVCLEHEGYPRRKAASWWRE
RAPEMDVPESVDEALLLADRLRRPTDIAVRPAGRFTEITACRFAPCLTAVPGSAPSAIES
PVAGAGSTRASASPTRGATRAAETSAAGFARTSATGGRA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccctgcgcccctaccagcaggccgcgatcgcctcgatctacggctatttcgag
aaggagagcggcaacccgctcgtcgtgatccccacggccggcggcaagagcctcgtcatg
gccgccttcatcgacggcgttctcaaggcctggcccgaccagcgcgtgctggtcgtcacc
catgtccgcgaactgatcgcgcagaaccatgccgagatgctggggctctggcgcgaggcg
cctgcgggcatctactcggccgggctcggccgccgcgacgcgcgggcccggatcctcttc
gccggcatccagtccatccacgacaaggcgacgcgcatcggccatgccgatctggtgctg
atcgacgaggcccatctgatccccggtcggtcgaacaccatgtatcgccgcttcctcaac
gatctgcaggcgatcaaccccgcgctcaaggtgatcggtctgaccgcgacgccgttccgg
ctcgacagcggcatgctgcacgagggcgagaatgcgctcttcaccgacatcgcctacgag
gtgtcggtccgcgacctgatcgatcagggctatctctccccgctcatctcgaaacagacg
aagacccgcctcgacgtgacgggcgtgggatcgcggggcggcgagttcatcgcgcgcgac
ctcgaggacgcggtcgatcaggacgccatcacacgcgcggccgtggccgaggtgatcgcc
catggcgagacgcgccggtcctggctcgcgttctgctcgggcgtccgccacgccacccat
gtcgccgaggagttccgccgccgcggcgtcagctgcgcgacgatcttcggcaagacgccg
aaggacgagcgtgacgcgatcatcgccgccttcaagcgcggcgagatcagggcgctggcc
tccatgggggtgctgacgacgggcttcaacgcgccggccgtcgacctgatcgccatgctg
cggcccaccaagtcggccgggctctatgtccagatggccggtcggggcacgcggctcgcc
gagggcaaggagaactgcctcgttctcgatttcgcgggcaatgtccgccggcacggcccc
atcgatctcgtgcggccgaaacggccgggcggtccgggggacgggccgccgcccaccaag
atctgcccgaaatgcgggaccatcgtggccatcgcggcgctcgaatgccccgactgcggt
ttcgagttccccggccgcgaggtgaagctggagccgaccgcctcgacgctggaggtgttg
tctaccggcaagccgcaatgggtcggcgtcaccgacgtcacctacagccgccgcgagaag
cgcggcgggcgtgtctcgttgaaggtcacctaccgctgcgggctcgccttccacacggaa
tgggtctgcttagagcacgagggctatccgcgccggaaggccgcgagctggtggcgcgaa
cgggcgccagagatggacgtgcccgagtccgtcgacgaggcgctcctgctggcggaccgg
ctgcgccgtcccaccgatatcgccgtccgccctgcgggccgcttcaccgaaatcaccgcc
tgcaggttcgccccatgccttacagccgtgccgggctctgcgccgtctgccatcgagagc
cccgtggctggggctggttcgacgcgcgcttccgcgtctccgacccgcggcgcgacacga
gccgccgagacctctgcagccgggtttgccaggacatctgccaccggaggtcgggcatga
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