Alternaria alternata: CC77DRAFT_1023146
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Entry
CC77DRAFT_1023146 CDS
T05291
Name
(RefSeq) TFIIH basal transcription factor complex p44 subunit
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
aalt
Alternaria alternata
Pathway
aalt03022
Basal transcription factors
aalt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CC77DRAFT_1023146
09124 Replication and repair
03420 Nucleotide excision repair
CC77DRAFT_1023146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aalt03021
]
CC77DRAFT_1023146
03400 DNA repair and recombination proteins [BR:
aalt03400
]
CC77DRAFT_1023146
Transcription machinery [BR:
aalt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CC77DRAFT_1023146
DNA repair and recombination proteins [BR:
aalt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CC77DRAFT_1023146
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Tfb4
eIF3g
DUF4769
Motif
Other DBs
NCBI-GeneID:
29111211
NCBI-ProteinID:
XP_018383057
JGI:
1023146
UniProt:
A0A177DDN1
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MADSDYDFDDESSADEYVGAKSGTSSTRAQSSAPGKRRKVEAPVKEPPKRQAWETEYSRT
VQKTIEPADDGTLGQSVQEREEERKRKRLRKDTKPFQRGIIRHVVLVLDLSEAMMEKDMR
PNRYITMINYTQDYIREFFEQNPISQMSVLGMHDGVCIRVSELSGNPAEHVAAIQGLRSK
DDGKEPKGAPSLQNALELARATLYHTPSHGTREVIVVFGSLLSLDPGDIHQTVKACVRDR
IRVSVIGMGARLKICTEIVTRTNAGDESEYTIATDQEMLKELLLATTTPPVIRTTAPAVA
APAAPQAPDPSSAAALMMMGFPSRVVEDQLTMCACHGNLTMGGYTCSRCSAKVCSLPITC
PSCQLTLLLSTHLARSYHHLFPLRNWSTVSWSRAREKGSKQCVGCLASFSDPPSSNNERS
EAEQDGEVNKEKRDEEDSEEQKASESGRYECRACESHFCIDCDMFAHMVLHNCPGCLGRL
DPGAVVQASNGNGDVEMTG
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggccgattcggattacgatttcgatgacgagagttcagccgacgagtacgttggtgcg
aagagcggtacttcaagcacacgcgcacaatcttcggcgcctggcaagaggcggaaagta
gaggcgcctgtgaaggaaccgccaaagcggcaggcatgggaaacagaatactcgcggacg
gtccagaagacgatagaaccggcagacgatggcacactaggacagagcgtacaagaacgg
gaagaagagaggaagcgcaaaaggttacggaaagatacaaagcctttccagcgaggtatc
atacgtcacgtcgtcctggtgcttgatctgtcagaggccatgatggaaaaagacatgcgg
cccaaccgatacatcacgatgatcaactacacacaagactacatccgcgagtttttcgaa
caaaaccctatatcgcagatgagcgtactgggtatgcacgatggtgtctgcatacgagtc
tcggagctctcgggcaacccagcagaacacgttgcagcgatacaaggcctgagaagcaaa
gatgacggcaaagagcccaagggcgcgcccagtttgcagaacgcattggaactggcaaga
gcaacattataccacacaccaagccacggcacgcgagaggtcattgttgtctttgggagc
ttgttgagtttagatccgggtgatatacaccaaacagtcaaagcctgcgtacgagaccga
atacgtgtcagcgtaattggtatgggcgcgcgcctcaagatctgcacagaaattgtcact
cggacaaacgctggtgatgaatccgagtacacaatcgcaaccgatcaggaaatgctcaag
gagctcctcctcgccactacaacaccccccgtaatccgtacaacagcaccggcagtcgca
gcaccagccgctccgcaagccccagatccttcctccgccgcagcactcatgatgatgggt
ttcccatcccgtgtagtagaagaccaactaaccatgtgcgcatgccacggcaacctcaca
atgggaggttacacctgttctcgctgcagcgcaaaagtctgctccttacctatcacctgc
ccctcctgccaactcaccttgctcctctccacccatctcgcgcgatcttaccaccatctt
ttccccctccgcaactggtccacagtatcctggtcgcgcgcccgcgaaaagggaagtaag
cagtgtgtgggctgtctagcttcctttagtgatccgccaagcagcaataatgaaagaagt
gaggcggaacaagacggcgaggtcaacaaagagaagagggacgaagaggatagcgaagag
cagaaggcgtctgagagcgggaggtatgaatgcagggcttgtgaaagtcacttttgtatc
gattgtgatatgtttgcgcatatggtcctgcataattgtcctgggtgtttggggaggttg
gatccgggggctgttgtgcaggcgagtaacggaaatggggatgtcgagatgacagggtga
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integrated database retrieval system
