Alternaria alternata: CC77DRAFT_1024119
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Entry
CC77DRAFT_1024119 CDS
T05291
Name
(RefSeq) transcription factor Tfb2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
aalt
Alternaria alternata
Pathway
aalt03022
Basal transcription factors
aalt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CC77DRAFT_1024119
09124 Replication and repair
03420 Nucleotide excision repair
CC77DRAFT_1024119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aalt03021
]
CC77DRAFT_1024119
03400 DNA repair and recombination proteins [BR:
aalt03400
]
CC77DRAFT_1024119
Transcription machinery [BR:
aalt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CC77DRAFT_1024119
DNA repair and recombination proteins [BR:
aalt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CC77DRAFT_1024119
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
29111403
NCBI-ProteinID:
XP_018381648
JGI:
1024119
UniProt:
A0A177DAI7
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MSASSSAQALEYLEGLPIATHKRLYEQPSTVLAVYRCMLPHLAKSIVMAMLYRPSSFPVA
DLDAWFKPSARREKEQAVFTLERLHVIAQVKQDDGTMAWTISTGFQKSLRNALEGSGTHR
SFGVPATREESGGKRLSVDFLDEYSRSQWEGILYYLVSGAAGLSKDSISRAEVGPGTKKL
LHTGDLVRTIHGSPRITKDGFSFVLQETNAQVWSLLIVYLKMTNELGMSETEVLSFLFML
GSLELGQDYSTSTLSPTQAQMLEDLSSMGLIYRSDKNARTFYPTRLATTLTSDSGSAMSA
SSNDIAQANQGNAGPSAAANKGFIIIETNYRLYAYTNSLIQIAILSLFTKLQHRFPNLVS
GKLTKESVHKAVQSGITSSQIISYLTTYAHPQMQKTVPYIPPTVMDQIRLWEYEGERVET
TTGYLMREFGSDAEYRDVLGYASALGVLVWQNDAGRCFFVSHVEQISAYLRKKKESRESA
RAGR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcctcgtcgtctgcgcaggcgctggaatacttggagggcctgcctattgctacg
cataagaggctatatgagcagccctcgactgtgttggcggtgtaccgctgcatgctgccg
catcttgccaaatctatagtcatggcaatgctctacagaccctcgtccttccccgtagcc
gacctcgacgcatggttcaagccctccgcccgcagagagaaggaacaagccgtctttact
ctcgaacgcctgcacgttatcgcccaagtgaaacaagatgacggcactatggcatggaca
atcagcacaggtttccagaagagcctacgaaacgccctcgagggctctggtacgcaccgc
tcgtttggtgtcccagcaactagagaagagagtggcggaaagcgattgagcgtagatttc
ctggacgaatattcgagatctcagtgggagggtatattgtactatctggttagcggtgcg
gctggactcagcaaggacagtatctcgcgagccgaggtcggtcctggaacaaagaagctg
ctccatactggtgatcttgtgaggactatacatgggagtccgaggatcacgaaggatggt
ttctcatttgtgctgcaagagacgaatgcacaggtctggagtttattgatcgtgtatctg
aagatgacgaacgaactcggcatgtccgaaaccgaagtcctgtccttcctcttcatgctc
ggctcccttgaactaggccaagattactccacatccacactctcacctacacaagcccaa
atgctcgaagatctgtcctcaatgggcctcatctaccgctccgacaagaacgcacgaacc
ttctacccaacccgcctcgccacaaccctaacctccgactccggcagcgccatgtccgcc
tcctccaacgacattgcacaagccaaccaaggcaacgcaggtccctcggccgccgcaaac
aagggcttcatcatcatcgaaacaaactaccgcctctacgcctacacaaacagtctgatc
caaattgccattctgagcttatttaccaaactccaacaccgctttcccaatctcgtctcg
ggtaagttgacaaaggaatctgttcacaaggctgtacagtcgggtatcacttcttcgcaa
atcatctcctatttaactacgtatgcgcatccccagatgcagaagacggttccgtatatc
ccgcctacggtcatggatcagattcggctgtgggaatatgaaggcgagagagtggagacg
accacggggtatctgatgcgcgagtttggtagtgatgcagagtatagggatgttctgggt
tatgcgagtgcgcttggggtgttggtttggcagaatgatgctgggaggtgcttttttgtg
tctcatgtcgaacagattagtgcgtatttgaggaagaagaaggagagtagggagagtgct
agggcggggaggtag
DBGET
integrated database retrieval system
