KEGG   Acidianus ambivalens: D1866_10805
Entry
D1866_10805       CDS       T06309                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
aamb  Acidianus ambivalens
Pathway
aamb03030  DNA replication
aamb03410  Base excision repair
aamb03420  Nucleotide excision repair
aamb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aamb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D1866_10805
   03410 Base excision repair
    D1866_10805
   03420 Nucleotide excision repair
    D1866_10805
   03430 Mismatch repair
    D1866_10805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aamb03032]
    D1866_10805
   03400 DNA repair and recombination proteins [BR:aamb03400]
    D1866_10805
Enzymes [BR:aamb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     D1866_10805
    6.5.1.6  DNA ligase (ATP or NAD+)
     D1866_10805
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     D1866_10805
DNA replication proteins [BR:aamb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    D1866_10805
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     D1866_10805
DNA repair and recombination proteins [BR:aamb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     D1866_10805
   NER (nucleotide excision repair)
    Other NER factors
     D1866_10805
   MMR (mismatch excision repair)
    Other MMR factors
     D1866_10805
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: QGR22408
UniProt: A0A650CX87
LinkDB
Position
1903226..1905028
AA seq 600 aa
MEFKIIAEYFDRLEKISSRLQLTSLLADLFKKTDKNVIDKVVYIIQGKLWPDFLGMPELG
IGEKFLIRALSIATSVSDDEIEKMYKSVGDLGQVAFDIKQKQQSASILAFLGAQKASKPL
TVEKVYDDLAKVATSTGEGSRDIKIRLLAGLLKDASPLEAKYLVRFVDGRLRVGIGDATI
LDALAITFGGGQNFRPIVERAYNLRADLGNIAKILANGGIEQLKNIKPQPGIPIRPMLAE
RLSDPAEMLSKVGNIALVDYKYDGERGQIHKAGDKIFIFSRRLENITNQYPDVAEYISKY
VKGNEFIVEGEIIPVDPETGEMRPFQELMHRKRKSDIHEAIKEYPVNVFLFDLMYYEGED
YTVKPLSERRKKLESIVEDNDYVHIATHIITDNVEKLKEFFYQAISEGAEGVMVKSLAPD
AIYQAGSRGWLWIKFKRDYQSEMADTVDLVMVGAFHGKGRKGGKYSSFLMAAYNPDKDVF
ETVCKVASGFTDAELDDLQKKIAELKRDTPHPRVVSTMVPDVWLTPALVAEIIGAEITIS
PLHTCCKDQYAEGGLSIRFPRFIRWRPDKSPEDATTNREILEMYKSQLKKIEEKPSDQSV
NT seq 1803 nt   +upstreamnt  +downstreamnt
atggagtttaaaattatagctgaatactttgatagactagaaaagatctcttctaggctt
caacttacatcattacttgcagatctttttaagaaaactgacaaaaatgttattgataaa
gttgtatatataattcagggtaaactatggccagacttcttaggaatgccagaattagga
ataggtgaaaaattccttataagagcattatcaatagctacaagcgtaagcgatgatgaa
atagaaaaaatgtataaatcagtaggagatttggggcaagtagcttttgatataaagcaa
aaacagcagtctgccagtattttagcgtttttaggagcgcaaaaagcttcaaagccgcta
actgtagaaaaagtttatgatgatttagcaaaagttgctacaagcactggagaaggtagt
agagatattaaaatcagactattagcaggattacttaaggatgcttctccacttgaggct
aaatatttagttagatttgttgatggtaggttaagggttggaataggagacgctacaata
ttagacgcactagcaataactttcggcggcgggcagaactttaggcctatagttgaaaga
gcatacaatttgagggccgatttaggtaatattgcaaaaatattagcaaatggcggaatt
gaacaactgaagaacattaaacctcagccagggattccaataaggccaatgctagctgaa
agattatcagaccctgcagagatgttaagtaaggtaggcaatattgcattggtcgattat
aagtatgatggagagagaggacaaattcataaagcaggagataaaattttcatattctct
agaagattggaaaatataacaaatcaatatcctgacgtagcagagtatatttcaaaatac
gttaaaggtaatgagttcatagttgagggagaaataataccagtagatccagaaactggt
gaaatgagacctttccaagaattgatgcacaggaaaaggaagtccgatattcacgaggct
ataaaagagtatccggttaacgtattcttatttgatttaatgtactatgaaggagaagat
tatacagtaaagccgttatcagaaagacgtaagaagttagaatcaatagttgaagataac
gattatgtacatatagccactcatattataactgataatgtagaaaaactaaaggaattc
ttctatcaagcaatctctgaaggcgcagaaggcgtaatggtaaaatctctggcaccagat
gcaatatatcaagcaggatcaagaggttggctttggataaagtttaagagagattaccag
agcgaaatggcagatactgtagacctggtaatggtaggtgcttttcacggtaaaggaagg
aaaggaggcaaatatagttccttcttaatggctgcatataatccagacaaggacgttttc
gagactgtatgtaaagttgcttctggttttactgatgcagaacttgacgatttacagaag
aaaattgccgagttaaaaagagacacacctcatccaagagttgtatcaaccatggttcca
gatgtttggttaacaccagcacttgttgccgaaataattggagcagaaataactatatct
cctctacatacttgttgcaaagatcagtatgcagaaggtggtttatcaataagattccca
agatttataaggtggagaccagataagagtccagaagatgcaactactaatcgtgaaatt
cttgagatgtataagagccaattaaagaagattgaagaaaagccgtcagatcagagtgta
taa

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