KEGG   Arvicola amphibius (Eurasian water vole): 119803921
Entry
119803921         CDS       T08327                                 
Name
(RefSeq) ATP-dependent translocase ABCB1
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp02010  ABC transporters
aamp04976  Bile secretion
aamp05206  MicroRNAs in cancer
aamp05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    119803921
 09150 Organismal Systems
  09154 Digestive system
   04976 Bile secretion
    119803921
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    119803921
  09162 Cancer: specific types
   05226 Gastric cancer
    119803921
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:aamp02000]
    119803921
   04147 Exosome [BR:aamp04147]
    119803921
   04090 CD molecules [BR:aamp04090]
    119803921
Enzymes [BR:aamp01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     119803921
Transporters [BR:aamp02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    119803921
Exosome [BR:aamp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   119803921
CD molecules [BR:aamp04090]
 Proteins
  119803921
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N ABC_ATPase AAA_16 AAA_22 Rad17 Zeta_toxin RsgA_GTPase AAA_5 AAA AAA_14 AAA_28 AAA_29 G-alpha AAA_30 DUF87 AAA_7 APS_kinase AAA_15 DUF815 nSTAND1 NTPase_1 nSTAND3 DUF3487
Other DBs
NCBI-GeneID: 119803921
NCBI-ProteinID: XP_038171332
LinkDB
Position
18:12729636..12802304
AA seq 1275 aa
MELEEDLNGRADKNSKMGKKSKKEKKEKKPVVSVFTMFRYAGWLDRLYMLVGTLAAIIHG
VALPLMMLVFGEMTDTFASVGNIPQNITNETEFNFTISLSNLEDEMTTYAYYYTGIGAGV
LIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEG
IGDKIGMFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELQ
AYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKKLGIKKAITANISMGAAFLL
IYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSIGQASPNIEAFANARGAAYEV
FKIIDNKPSIDSFSTNGHKPDNVKGNLEFRNIHFSYPSRKEVQILKGLNLKVQSGQTVAL
VGNSGCGKSTTVQLLQRLYDPTEGVVSIDGQDIRSINVRYLREIIGVVSQEPVLFATTIA
ENIRYGRENVTMDEIEKAVKEANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIARAL
VRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGV
IVEQGNHDELMKEKGIYFKLVMTQTAGNEIELGNEVYESKNETDNLDMSSKDSGSSLIRR
RSTRKSIRAQHDQDRKLSIKETPDEDVPPVSFWRILKLNSTEWPYFVVGTLCAIINGGLQ
PAFAIIFSKVVGVFTKQTDDETKRQESNLFSLLFLVLGIISFITFFLQGFTFGKAGEILT
KRLRYKVFRSMLRQDVSWFDNPKNTTGALTTRLANDAAQVKGATGSRLAIIAQNIANLGT
GIIISLVYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFR
TVVSLTREQKFEDMYAQSLQIPYKNSLKKAHIFGITFSFTQAMMYFSYAACFRFGAYLVA
HELMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKAKVSASHIIMIIEKVPEIDSYSTEG
LKPSTLEGNVQFRDVMFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLER
FYDPRAGTVFLDGKEAKHLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSRVVSQDEI
ERAAKEANIHQFIESLPDKYSTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSA
LDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEQGTHQQLLAQKG
IYFTMVSVQTGAKRS
NT seq 3828 nt   +upstreamnt  +downstreamnt
atggagcttgaagaggacctgaacggaagagcagacaagaactcgaagatgggcaaaaag
agtaaaaaggagaagaaagaaaagaaaccagtggtcagtgtgtttacaatgtttcgctat
gcaggttggctggacaggttgtacatgctggtgggaactctcgctgctattatccatgga
gttgcactcccgcttatgatgctggtgtttggagaaatgacagacacctttgcaagtgta
ggaaacatcccgcaaaacattactaatgaaactgaattcaactttacaatcagtcttagc
aacctggaggatgagatgaccacgtacgcctactattacacggggattggtgctggtgtg
ctcatagttgcctacattcaggtttcattttggtgcctggcggctggaagacaaatacac
aaaattagacagaagtttttccacgcgataatgaatcaggagataggctggtttgacgtg
catgacgttggggagctcaacacccggctcacagatgatgtctccaaaattaatgaagga
attggtgacaaaattggaatgttctttcaggcaatggcaacattttttggtggttttata
ataggatttactcgtggctggaagttaacccttgtgatcttggccattagccctgttctt
ggactgtcagctggcatttgggcaaagatattatcttcatttactgataaagagcttcaa
gcttatgcgaaagcgggagccgttgccgaagaagtcttagcggccatcagaactgtgatt
gcatttggaggacaaaagaaagaacttgaaaggtacaataaaaatttagaagaagctaaa
aagcttgggataaagaaagctatcacagccaacatttccatgggcgcagctttcctgctt
atctacgcatcatatgctctggcattctggtacgggacttccttggtcatctcgaaagaa
tactctattggacaagtgctcactgtcttcttttcggtattaattggggcgttcagtatc
ggacaggcatctccaaatatcgaggccttcgccaacgcaagaggagccgcctatgaagtc
ttcaagataattgataataagcccagtattgacagcttttcaacgaatgggcacaaacca
gacaacgttaaaggaaatttggaattcagaaatattcacttcagttatccatctcgaaaa
gaagttcagatcttgaagggcctcaacctgaaggtgcagagcggacagacggtggccctg
gtcggcaacagtggctgtgggaagagcaccacggtccagctgctgcagaggctgtatgac
cccacagagggcgtggtcagtatcgatggccaggacatcaggagcatcaatgtgaggtac
ctgcgggaaatcattggcgtggtgagtcaggaacctgtgttgtttgccaccacgatcgct
gaaaacattcgctatggccgagagaacgtcaccatggatgagatcgagaaagctgtcaag
gaggccaacgcctatgacttcatcatgaaactgccccacaaatttgacaccctggttggt
gagagaggggcgcagctgagtgggggacagaaacagagaatcgccattgctcgtgccctg
gtccgcaaccccaagatccttttgttggatgaggcaacatcagccttggacacagaaagt
gaagccgtggttcaggctgctctggataaggctagggaaggccggaccaccattgtgata
gctcaccgcttgtctacagttcgtaacgctgatgtcattgctggctttgatggcggtgtc
attgtagagcaaggaaatcacgatgagctcatgaaagagaagggcatttacttcaaactt
gtcatgacgcagacagcaggaaatgaaattgaactaggaaatgaagtttatgaatctaaa
aatgaaactgataatttagacatgtcttcaaaagattcgggatccagtctgataagaaga
agatcaactcgcaaaagtatccgtgcacaacacgaccaagacaggaaacttagtatcaaa
gagaccccggatgaagatgtacctccggtttccttctggcggatcctaaagttgaattcc
actgaatggccttattttgtggttggtacactttgtgccataataaatggaggcttgcag
ccagcatttgccataatattctcaaaggttgtaggggtttttacaaaacaaactgatgac
gaaaccaaacggcaggaaagcaacttgttttccttattgttcctggtccttgggatcatt
tcttttattacatttttccttcagggcttcacgtttggcaaagctggagagatcctcacc
aagcgactccgatacaaggttttcaggtccatgctgagacaggatgtgagctggtttgat
aatcctaaaaacaccactggagcactgaccaccagactcgccaatgatgctgctcaagtt
aaaggggctacaggatccagactcgctatcattgcccagaatatagcaaatcttggcaca
ggaattattatatccctagtctatggctggcagttgactcttctgctcttagcaattgta
cccatcattgccatagcaggagtggtggagatgaaaatgttgtctggacaagcactgaag
gataagaaggaactagaaggttctgggaagatcgccactgaagccatagagaacttccgc
actgtcgtctctttgactcgggagcagaagtttgaagacatgtatgctcagagcctgcag
ataccatacaaaaactctttgaagaaagctcacatctttgggatcacattctccttcacc
caagccatgatgtatttttcctatgctgcatgtttccggtttggtgcctacttggtggct
catgaattaatgacttttgaaaatgttctgttagtattctcagctattgtcttcggtgcc
atggcagtcggacaggtcagttctttcgctcctgactacgccaaagccaaagtgtcggcg
tcacacatcatcatgatcattgagaaagttcctgagattgacagctacagcacggaaggc
ctgaagccgagtactttggaaggaaatgtgcaatttagagacgtcatgttcaactatccc
acccgacctgacatcccagtgctccaggggctgagcctggaggtgaagaagggccagacg
ctggccctggtgggcagcagcggctgcgggaagagcacagtggtccagctgcttgagcgg
ttctacgaccccagggccggaacagtgtttcttgacggcaaagaagcaaagcacctgaac
gtccagtggctccgagcccacctaggcattgtgtcccaggagcccatcctgtttgactgc
agcatcgccgagaacatcgcctatggagacaacagccgggtcgtgtcccaggatgagatc
gagagggcggccaaggaggccaacatccaccagttcatcgagtcgctgcctgacaaatac
agcaccagagtaggagacaaggggactcagctgtcgggtgggcagaagcagcgcatcgcc
atagcgcgcgccctcgtcagacagcctcacattttgcttctggatgaagcgacgtcggct
ctggatacggagagcgaaaaggtggtccaggaagccctggacaaagccagggaaggccgc
acctgtatcgtgatcgctcaccgcctgtccaccatccagaatgcggacttgatcgtggtg
attcagaacggcaaggtcaaggagcagggcacgcaccagcagctgctggcccagaaaggc
atctatttcacaatggttagtgtgcagactggagcaaagcgctcatga

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