KEGG   Arvicola amphibius (Eurasian water vole): 119806604
Entry
119806604         CDS       T08327                                 
Symbol
Kdm5a
Name
(RefSeq) lysine-specific demethylase 5A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:aamp01009]
    119806604 (Kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aamp03036]
    119806604 (Kdm5a)
Enzymes [BR:aamp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     119806604 (Kdm5a)
Protein phosphatases and associated proteins [BR:aamp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     119806604 (Kdm5a)
Chromosome and associated proteins [BR:aamp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    119806604 (Kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_5 PHD_2 PHD_4 FRG1 ASH2L-like_WH DUF5407
Other DBs
NCBI-GeneID: 119806604
NCBI-ProteinID: XP_038174324
LinkDB
Position
2:complement(27528007..27610031)
AA seq 1690 aa
MAAVGPGGYAAEFVPPPECPVFEPSWEEFSDPLSFIGRIRPLAEKTGICKIRPPKDWQPP
FACEVKTFRFTPRVQRLNELEAMTRVRLDFLDQLAKFWELQGSTLKIPVVERKILDLYAL
SKIVASKGGFEIVTKEKKWSKVGSRLGYLPGKGTGSLLKSHYERILYPYELFQSGVSLMG
VQMPDLDIKEKVETEVLSTDIQPSPERGTRMNIPPKRTRRVKSQSDSGEVNRNTELKKLQ
IFGAGPKVVGLAVGAKDKEDEVTRRRKATNRSDAFNMQMRQRKGTLSVNFVDLYVCMFCG
RGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGDWRCPKCVAEECNKPREAFGFEQAVRE
YTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGS
GFPVKDGQRKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSF
CWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIM
NPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVN
HYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLMTEEETRLRESVVQMGVVM
SEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDLCSCPMQNKCLRYRY
PLEDLPSLLCGVKVRAQSYDTWVSRVTEALSASFNHKKDLIELRVMLEDAEDRKYPENDL
FRKLRDAVKEAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLFSLPCVI
SQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQ
ARWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAK
VCLQARPRHSMANLENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVEAIQSGSNYAYL
EQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPRTDI
GVYGSGKSRRKKVKEIIEKEKEKDLDLQPLSDLEEGLEETRDTAMVVAVFKEREQKEIEA
MHSLRAANLAKMTIVDRIEEVKFCICRKTASGFMLQCELCKDWFHNSCVPLPKSSSQKKG
SSWQAKDVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDRA
RQALATDELSSALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLPSFQQSA
FSRVASSVSSSPRQTVDYDDEETDSDEDIRETYGYDIKDTASVKSSSSLEPNLFCDEEIP
IKSEEVVTHMWTAPSFCAEHAYSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLELSPG
AKAQLEELMMVGDLLEVSLDETQHIWRILQATHPPSEDRFLHIMEDDSMEEKPLKMKGKD
SSEKKRKRKLEKVEQFFGEGKQKVKELKKTDKPKKKKLKLNVDKSKELNKLAKKLAKEEE
RKKKKEKAAAAKVELVKESTEKKREKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCK
DKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKQGPDSPGQAPPTPFIMSYK
LPMEDLKETS
NT seq 5073 nt   +upstreamnt  +downstreamnt
atggcggccgtgggcccagggggctacgcggcggagttcgtgccgccgccggagtgcccg
gtcttcgagcccagctgggaggagttctcagaccctctcagtttcatcggccgcatccgc
cctttggctgagaaaactggcatctgcaagatccgtcctcccaaggattggcaacctcca
tttgcttgtgaagtaaaaaccttccgcttcactcccagagtccagcgcctgaatgaactt
gaggcaatgactagagtgagattggacttcttggatcaactggcaaagttttgggaactt
caaggatctacattgaagatccccgtggtggagagaaaaatcctggatttgtatgcttta
agtaagattgttgccagcaaaggaggttttgaaatagtcaccaaagagaagaaatggtct
aaagtgggtagccgcttgggatatctgccaggaaaaggaactgggtctcttttgaagtca
cactatgaaagaattctctacccatatgagctttttcagtctggtgtcagccttatgggt
gtacaaatgcctgatttagatattaaagaaaaagttgagactgaggttcttagcactgat
atccaaccttccccagagcggggaacaagaatgaatattccgccaaagagaacaagacgt
gtcaagtctcagtcagactctggagaagtaaacaggaacacagaactgaagaaacttcag
atttttggggctggacccaaggttgtgggcctggcagtaggagcaaaagataaagaagat
gaggtcacccgaagacggaaagctaccaacagatcagatgcatttaacatgcaaatgaga
caacggaaaggaactctctctgttaactttgttgatctctatgtttgtatgttttgtggc
cggggaaacaatgaggataaattgcttttgtgtgatggatgtgatgacagctatcatacg
ttttgtctacttccgccactacctgatgtgcccaaaggagactggaggtgtcctaaatgt
gttgctgaggaatgtaacaaacctcgagaagcctttggatttgagcaagctgtaagagaa
tatacacttcaaagctttggcgagatggcggataattttaaatctgattatttcaatatg
ccagtccatatggttcctacagaactagtagaaaaggaattctggcggctagtgagtagt
attgaagaagatgttattgtagagtatggagctgatatctcttcaaaagattttggaagt
ggatttcctgtaaaggatggtcagagaaagatgttgccagaagaagaggagtatgcactt
tctggttggaatttgaataacatgcctgttctggagcaatctgttcttgcacatattaat
gtggacatttctggtatgaaggtgccatggctgtatgtggggatgtgtttttcttctttt
tgctggcatattgaagatcactggagctattccattaactacttgcattggggcgagcca
aagacatggtatggtgtaccatctcatgctgcagaacaactggaggaggtgatgagggag
ctggcccctgagttatttgaatcacagcctgatctcctacatcagttagtaaccatcatg
aacccaaatgtgctcatggagcatggtgtgccagtgtacaggactaatcagtgtgctgga
gagttcgttgtgacgtttcctcgtgcctatcactctggatttaatcagggatacaacttt
gctgaagctgtgaacttctgtactgctgactggttgcccattggacgacagtgtgtaaat
cactatcgacggctgaggcgccattgtgtcttttcacacgaggaactaattttcaagatg
gcagccgatccagaatgcttagatgtagggctggctgccatggtttgcaaagagttgact
ctcatgactgaagaagaaacacgattaagggaatcagttgtacaaatgggtgtcgtgatg
tcagaagaagaagtttttgaacttgttcctgatgatgagcgacagtgttcagcatgcaga
accacatgttttctctcagctctcacgtgctcctgtaatccggagcgacttgtatgtctg
taccatccaactgatttgtgctcctgccccatgcagaacaaatgtcttaggtaccgctac
ccactagaagacctcccttctctactttgtggcgtaaaagtgagggcacagtcctatgac
acttgggtcagtcgtgttacagaagcattgtcagctagcttcaaccataagaaagatttg
attgaattgagagtaatgttggaagatgccgaggataggaaatacccagagaacgatctc
tttcgaaagctcagggatgcagtgaaagaagctgagacttgtggttctgtggctcagctg
cttctgagcaaaaagcaaaaacacaggcagagctcagatagtgggaagactcggaccaaa
ctgacagtagaagaattgaaggcctttgtccagcaactttttagtcttccgtgtgtcatc
agccaaactcgacaagtaaagaatctgctggatgatgtagaagaatttcatgaacgtgcc
caggaggccatgatggatgaaaccccagattcttccaaactccaaatgttgatagacatg
ggctctagtctctatgtggaactgcctgaattgcctcgactgaagcaagagctacaacag
gctcggtggttggatgaagtaagactaaccctgtcagatccacaacaagtcactttggat
gtcatgaagaagctcattgactctggggtagggttggcacctcatcatgctgtggaaaaa
gcaatggctgaactgcaggagctcctcacagtctctgaacgatgggaagagaaggctaag
gtctgcctgcaggcaagacctcgacacagtatggcaaatttagaaaatattgtgaatgaa
gccaagaacattccagcctttctacccaatgtattgtccttaaaagaagccttacaaaag
gctcgtgaatggacagctaaagtggaagctattcagagtggcagtaactatgcttacttg
gagcaacttgagagcttatctgctaaaggacgccccatccctgtgcgtcttgatgcactg
cctcaagtggaatcacaggtcgcagcagcacgggcctggagagaacggactgggcggacc
tttctaaagaagaattccagccacacattgttacaggtgctgagtcctcgaactgacatt
ggtgtatatgggagtggaaaaagtaggagaaaaaaagtaaaagaaataatagaaaaagaa
aaggagaaggacctagaccttcagcctttgagtgatttagaagaaggactagaggagacc
agagatacagccatggtggtggcagttttcaaagaacgagaacaaaaagagattgaggcc
atgcattccctcagagcagccaacctagccaagatgacaattgtggaccgcatagaagaa
gtaaaattttgtatttgccgcaagacagctagtgggtttatgctacagtgtgagctctgt
aaagactggttccataacagctgtgttcccctgcctaaatcaagttcccagaaaaaggga
tctagctggcaggctaaagacgtaaaattcctttgccctctttgtatgagatctcgaaga
cccaggctagagactattctgtcactcctggtatcccttcagaagttgcctgtacggttg
cctgaaggagaggcacttcagtgtttgacagaacgtgccatgagttggcaagacagagca
cggcaagccttagccacagatgaactgtcctctgccctggccaaactctctgtgttaagc
caacggatggtggaacaagcagcacgagaaaaaactgaaaagatcatcagtgcagaactc
caaaaagcagctgctaatccagacttgcagggacacttacctagtttccaacagtctgct
tttagccgggtggcgagtagtgtatcatcttccccccgccaaacagtggactatgatgat
gaagaaacagattctgatgaagatattcgggaaacatacggctatgacataaaggataca
gccagtgtgaaatcctctagtagtctggagcccaatctcttttgtgatgaagaaattccc
attaagtctgaggaagtggtaactcacatgtggacagcaccttcgttctgtgcagaacat
gcgtattcttctgcttctaagagttgttctcaaggttctagcacaccaagaaagcagcct
cgaaagagccctttggttccccgaagtttggagcctccggtgttggagttgtctcctgga
gcaaaagcccagttggaagaactcatgatggtgggagacctcctagaagtatctctggat
gagacacaacacatatggcggattctgcaggccacacatcccccctcagaggacagattc
ttacatatcatggaggatgatagcatggaagagaaaccactaaaaatgaaaggaaaggat
tcttctgagaagaaacggaaacggaagctagagaaggtagaacaattttttggagaagga
aaacagaaggtcaaggagctaaagaaaacagataaacctaaaaagaaaaaattaaaatta
aatgtggacaaatccaaagagctgaataagttggccaagaagctagccaaagaagaagag
agaaagaaaaagaaagaaaaggctgctgcagccaaagtcgaacttgtgaaagagagtact
gagaagaaaagagagaaaaaagtgctggatatcccctcaaagtatgactggtcaggagca
gaggaatctgatgatgagaatgctgtgtgcgcagcccagaactgccaaaggccgtgtaag
gacaaggtagactgggtgcaatgtgatggtggctgtgatgagtggtttcatcaagtttgt
gttggtgtatccccagaaatggctgaaaatgaagattacatctgtataaactgtgcaaag
aagcaggggccagatagcccaggccaagcaccacctactcccttcataatgagctacaaa
ctaccaatggaggatcttaaagagaccagttag

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