Arvicola amphibius (Eurasian water vole): 119811936
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Entry
119811936 CDS
T08327
Symbol
Pcgf5
Name
(RefSeq) polycomb group RING finger protein 5 isoform X1
KO
K11489
polycomb group RING finger protein 5
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03083
Polycomb repressive complex
aamp04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119811936 (Pcgf5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
119811936 (Pcgf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119811936 (Pcgf5)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
119811936 (Pcgf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-RING_10
zf-Nse
zf-rbx1
zf-RING_6
zinc-ribbons_6
Prok-RING_4
DUF1272
TRAF3_RING
DZR_2
Motif
Other DBs
NCBI-GeneID:
119811936
NCBI-ProteinID:
XP_038182082
LinkDB
All DBs
Position
1:176783847..176903518
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AA seq
271 aa
AA seq
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MATQRKHLVKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQV
HETNPLEMLRLDNTLEEIIFKLVPGLREQELQRELEFWKKNKPQENGQDDISKVDKSKAD
EEGDENQDDKDYHRSDPQIAICLDCLRNNGQSGDNVVKGLMKKFIRCSTRVTVGTIKKFL
SLKLKLPSSYELDVLCNGEIMGKDHTMEFIYMTRWRLRGENAPKIWSKYKISDYVKYFEV
WLYELLNLASLLSGWHFVSVVPNGIAVPTKN
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggctacccagaggaaacacttggtgaaagatttcaatccttacatcacctgctacatc
tgtaaaggctatctgatcaagcccaccacagtgacagagtgcctccatacattctgtaag
acctgtattgtccagcactttgaagacagcaatgattgtccgaggtgtggcaaccaagtt
catgaaacaaatccattagaaatgttgaggttggataatacattggaggaaattatattt
aagctggtacctggactacgagaacaagaacttcagcgtgaattggaattttggaagaaa
aataaacctcaagaaaatggacaagatgacatttcaaaggttgataaatctaaagcagat
gaagaaggagatgaaaaccaagatgataaagactatcatagaagtgacccacaaattgct
atctgtctggattgtttacgaaataatgggcagtcaggggacaatgtagtaaagggtctc
atgaagaaattcattcgatgttctacacgagtcactgtaggaactattaaaaagtttcta
agtttaaaactaaaacttccaagttcttacgagttggacgtgctgtgcaatggtgaaatt
atgggaaaggatcatactatggagttcatctatatgacaagatggcgactaagaggagaa
aatgcacctaaaatttggtccaagtacaagatcagtgactatgttaaatattttgaagtt
tggctgtatgaactgctcaacctcgcaagtctgctctcaggatggcactttgtatcagtc
gtacccaatggtattgcagtaccgaccaagaattga
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