Arvicola amphibius (Eurasian water vole): 119812580
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Entry
119812580 CDS
T08327
Symbol
Dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119812580 (Dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
aamp04054
]
119812580 (Dhx58)
Enzymes [BR:
aamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119812580 (Dhx58)
Pattern recognition receptors [BR:
aamp04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
119812580 (Dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C
ResIII
Helicase_C
DEAD
RIG-I_C-RD
SWI2_SNF2
Terminase_6N
Motif
Other DBs
NCBI-GeneID:
119812580
NCBI-ProteinID:
XP_038183262
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All DBs
Position
4:20908356..20917980
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AA seq
620 aa
AA seq
DB search
MELRPYQWEVILPALEGRNIIIWLPTGAGKTRAAAFVARRHLETVDGGKVVVLVNRVHLV
SQHAEEFRSMLDKRWTMTTLSGDMGPRAGFGLMARSHDLLICTAELLQLALVSSEDEEHV
ELTEFSLIVVDECHHTHKDTVYNVILSRYLEHKLQRAKRLPQVLGLTASPGTGGATKLQG
AIDHILQLCANLDTWRIMSPENCRPQLLEHNPKPCKQYDLCQRRREDPFGDLLKELMKQI
HQQLAMPELSQQFGTQTYEQQVVVLSKAAAEAGLQQRRVYALHLRRYNDALLTHDTVRAR
DALDMLQDFYHRERATKTQMLRAERWLLELFDGHKNELAQLAARGPENPKLEMLEGILLK
QFGSPNHPRGIIFTRTRQSASSLLLWLWQQPGLQKVNIKAQMLIGAGNTSQSTHMTQKDQ
QEVIQEFRDGTLNLLVATSVAEEGLDIAQCNVVVRYGLLTNEISMVQARGRARAGQSVYS
FVATEGSREVQRELTNEALEVLMEQAVAAVQKMDPQEFKAKIQDLQRAALVKRAVRAAQR
ESQQRQFPAERVQLLCINCMVAVGYGSDLRKVEGTHHVNVNPNFSVYYTVSQKPVVINKV
FKDWRPGGTISCSSNCGGGK
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgaccctaccaatgggaagtgatcttacctgctctggaaggcaggaatatc
ataatatggttgcctacgggcgctggcaagacccgggcagctgcttttgtggccaggcgg
catctagagacagtagatggaggcaaggtggtggtgctggtcaacagggtacacctggtg
agccagcatgctgaggagttcaggagcatgttggataaacgctggaccatgactaccctg
agtggggacatgggaccacgagctggctttggcctaatggctcggagccatgacctgctc
atctgcacagcagagctcttgcagctggcgctggtcagctcagaagacgaggaacacgta
gagctcacagagttctccctgatcgtggtggacgagtgtcaccacacccacaaggatacg
gtctacaacgtcattctgagccgctacttagagcacaagctacagagggcaaaacgcctt
ccccaagtgctggggctcacggcctccccaggcactggcggggccaccaagctccaaggg
gccattgaccacatcctacagctctgtgccaacctggatacgtggcgcatcatgtcacca
gagaattgccgcccccagctgctggagcacaacccgaagccctgcaagcagtatgacctc
tgccagaggcgcagagaggacccttttggagacttgctaaaagagcttatgaaacaaatt
caccagcaactagcaatgcctgaactgagccagcagtttggaacgcagacttacgagcag
caagtagtggtgctgagcaaggctgccgcagaggcaggactccagcaacggcgggtgtat
gcgctccacctgaggcgctacaatgacgcgttgttgacccacgacaccgtccgcgcacgg
gatgctcttgacatgttgcaagatttctaccacagggagcgcgccacgaaaactcagatg
ttgcgtgctgagcgctggctgctggagctcttcgatggccataagaatgagctggcccag
ttagcagctcgtgggcccgagaatccgaagttggagatgctggaagggatcctgctgaag
caatttgggagccccaaccaccctaggggcatcatcttcacccgaacccgccagagtgct
tcctccctcctgctctggctttggcagcagcctggcctacagaaagtgaacattaaggcc
cagatgctgattggggcagggaataccagccagagcacacacatgacccagaaagaccaa
caagaggtgatccaggagttcagggatggtaccctgaaccttctagttgccacaagtgtg
gcagaggaggggcttgatatcgcccagtgcaatgtggtggtacgctatgggctcctgacc
aatgagatctccatggtccaggccaggggccgggctcgagctggtcagagcgtgtactcc
tttgtggcgacagagggtagtcgggaggtgcagcgggaactgaccaatgaggctctggag
gtgctgatggagcaggcagtggctgcagtgcagaagatggacccccaagagttcaaggcc
aagatccaggacctgcagcgagcagctctggtgaagcgagcagtgcgagcagcccagcgg
gagagtcagcagaggcagttcccagcggagcgcgtgcagctcctctgcatcaactgcatg
gtggccgtgggctacgggagtgacctgcggaaggtggagggcacccaccacgtcaatgtg
aaccccaacttctcggtctactataccgtctcccagaagcctgtggtcattaacaaggta
ttcaaggactggaggcctggagggaccattagctgcagcagtaactgtgggggaggtaag
tga
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