Arvicola amphibius (Eurasian water vole): 119812756
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Entry
119812756 CDS
T08327
Symbol
Colgalt1
Name
(RefSeq) procollagen galactosyltransferase 1 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp00310
Lysine degradation
aamp00514
Other types of O-glycan biosynthesis
aamp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119812756 (Colgalt1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
119812756 (Colgalt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
aamp01003
]
119812756 (Colgalt1)
Enzymes [BR:
aamp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
119812756 (Colgalt1)
Glycosyltransferases [BR:
aamp01003
]
O-Glycan biosynthesis
O-linked Gal type
119812756 (Colgalt1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
119812756
NCBI-ProteinID:
XP_038183584
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Position
4:complement(105323615..105339883)
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AA seq
626 aa
AA seq
DB search
MAAFPGLLGLRFLPLLLLLPLPPGGPRGTDGYFPEERWSPESPLQAPRVLIALLARNAAP
ALPATLGALEQLRHPRERTALWVATDHNTDNTSAILREWLVAVKGLYHSVEWRPAEEPSY
SLSSYPDEEGPKHWSDSRYEHVMKLRQAALKSARDMWADYIMFVDSDNLITNPDTLSLLI
AENKTVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFLID
LRKAASRSLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNKEVYGFLPVPLRAHSSL
QDEAESFMHVQLEVMVKHPPVQLSRFISAPSKTADKMGFDEVFMINLKRRRDRRERMMRA
LHEQEIDCKLVEAVDGKAMNTSQVEALGIQMLPGYRDPYHGRPLTKGELGCFLSHYNIWR
ESPFLQVVDRGLQKSLVFEDDLRFEIFFKRRLMNLMRDVEREGLDWDLIYVGRKRMQVEQ
PEKAVARVRNLVEADYSYWTLAYVISLQGARKLLGAKPLAKMLPVDEFLPVMFDKHPVSE
YKTHFSPRDLRAFSVEPLLVYPTHYTGDDGYVSDTETSVVWNNEQVKTDWDRAKSQKMRE
QQALSREAKNSDVLQSPLDSAARDEL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttccccgggttgctcgggctgcggttcctgccgctgctcctgctgctgccg
ctgccgccgggtggcccgcggggcaccgacggctacttccccgaggagcgctggagccca
gagtcccctctgcaggcgccgcgcgtgctcatcgcgctgctggcgcggaacgcggcgccc
gcgctgccggccacgctgggcgccctggagcagctgcgccacccacgggagcgcaccgcg
ttatgggtggctacggatcacaacacggacaacacttcagccatactccgagagtggctg
gtggctgtgaagggtttgtaccactctgtggagtggcgaccagcggaggagcccagttac
tcccttagttcctacccagatgaagagggccccaaacactggtctgactcccgctacgaa
catgtcatgaagttgcgccaggcggctctcaagtcggctcgggatatgtgggctgattac
atcatgtttgtggacagtgacaacttgatcaccaaccctgacaccctgagtctcctcatt
gctgagaacaagacagtggtggccccgatgctggattcccgtgcagcctactccaacttc
tggtgtgggatgacgtcacagggctactacaagcgcacccctgcctacatccccatccgg
aagcgagaccgcagaggctgcttcgctgttcccatggtgcactctacctttctcatcgac
ctgcggaaggcggcgtccaggagccttgccttctatccgccgcaccctgactacacctgg
tcttttgacgacatcattgtcttcgccttctcctgcaaacaggcagaggtgcagatgtac
gtgtgcaataaggaggtgtacggcttcctgcccgtgcctctgcgtgcgcacagcagcctg
caggacgaggcagagagcttcatgcatgtgcagctggaggtcatggtgaagcacccgcca
gtgcagctctcccggttcatctcagcacccagcaagactgcagacaagatgggcttcgac
gaggtcttcatgatcaacctgaagcggaggcgggaccggcgagaacgcatgatgcgggcc
ctgcatgagcaagagatcgactgcaagttggtggaggccgtggatggcaaagccatgaac
accagccaggtggaggccctgggtatccagatgctgcctggctaccgggacccctaccat
gggcgacccctcaccaagggagagctgggctgcttcctcagccactacaacatctggagg
gagagccccttccttcaggtggtcgaccggggactgcagaaatccctcgtgtttgaggat
gatctgcgttttgagatcttcttcaagagacgcctgatgaacctcatgcgggatgtggag
cgcgagggcttggactgggacctcatatacgtgggccggaagcgcatgcaggtggagcag
ccagaaaaggccgtggcccgcgtgaggaacctggtggaggctgactactcctactggacg
ctcgcctacgtgatctccctgcagggcgcgcgcaaactgcttggagccaagccgctggcc
aaaatgctgccggttgacgagttcctgcccgtcatgtttgacaagcacccggtatcagaa
tataagactcacttctctccccgtgacctgcgcgccttctctgtggagccactcctcgtc
taccctacacactacacgggggacgacggctacgtgagcgacacagagacctcagttgtg
tggaataacgagcaggttaagaccgactgggaccgagccaagtcccagaagatgcgagag
cagcaggcgctgagccgcgaggccaagaactctgatgtgctgcaatccccgctggacagc
gctgctcgtgacgaactctga
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