Arvicola amphibius (Eurasian water vole): 119814414
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Entry
119814414 CDS
T08327
Symbol
Samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03250
Viral life cycle - HIV-1
aamp04623
Cytosolic DNA-sensing pathway
aamp05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119814414 (Samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
119814414 (Samhd1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
119814414 (Samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119814414 (Samhd1)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
119814414 (Samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
PDEase_I
Motif
Other DBs
NCBI-GeneID:
119814414
NCBI-ProteinID:
XP_038186042
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All DBs
Position
5:21201739..21239747
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AA seq
660 aa
AA seq
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MAPLHGLASRAVASVRLRASRVPRYLISLRLESQVAMRRADPEQPAKRPRCDGSPRTPQS
TRPAAANASPGSELHIDLPTWDVEDVCSFLEGEGFREKKVLDSFRKRNITGSFLPFLDES
LLENLGVSSLEEKKKMIACIQKLSQSHIELMKVFNDPIHGHIEFHPLLIRIIDTPQFQRL
RYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGYVVRALAEKQPELQISERDMLCVQIAGL
CHDLGHGPFSHMFDGRFIPLACPHKNWKHEEGSAKMFEHLVASNNLRPVMINYGLDPDED
ILFIKEQIKGPDPKTPNKDSLWPYKGRPIEKSFLYEIVANKRNGIDVDKWDYFARDCHHL
GIKNNFDYKRYVMFSRVCEVEDSEGGYKMKHICTREKEVGNLYDMFYTRSSLHRRAYQHK
ISNLIDIMIQEAFIKADPYVEIIGAEGKKYSISTAIDDMVAFTKLTDNIYLEILNSTDSR
LSEARSILRNIERRDLYKYLGETQPNGQRKIRKEEYEQLPREIVNTKPDVHLEAQLKAED
FIVDVLNMDYGMEDKNPIDHVLFYSKNNTRQAVKISKEQVSQLLPQKFAEQRIRVYCKKK
DRKSLYAARQHFIQWCADRDFTKPQDGDIMAPLITPLKWQKDDPGCHQEASKVRVQLNFN
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgctgcatggactcgcctccagggcagtggcgtcagtgcgactgcgcgcgagc
cgggtgccgcggtacttaatttcgctgcgcctagaatcgcaggtagccatgcggagagcg
gaccccgagcagcccgcaaagcggcctcgctgcgatggcagccccagaacgccgcagagc
acacgtcctgcagcggccaacgcgtctccgggctccgaactccacatcgacctcccgacc
tgggatgtggaggacgtgtgctccttcttggagggagaaggcttccgagagaagaaagtg
ctggacagcttcagaaagagaaacatcactggttcatttctgccctttcttgatgagtct
cttcttgaaaatcttggagtaagttccttggaggagaagaagaagatgattgcatgtatc
caaaaactgagtcaatctcacatagagctaatgaaggtatttaatgatcctattcatggc
catattgagttccacccgctccttatccgaatcattgacacacctcagtttcagcggctt
cgctacatcaaacagctgggaggcggctactatgttttccccggagcttcccacaatcgc
tttgaacacagtctgggggttggatacctagcaggctacgtcgttcgagcactggctgaa
aaacagccggagttgcagatcagtgagcgagatatgctttgtgttcagattgctgggctc
tgccacgacctcggtcatgggccattttctcatatgtttgatggaagatttatcccactt
gcttgcccacataaaaattggaagcatgaagaaggctcagctaagatgtttgagcatctg
gttgcttctaataacctcagacctgtcatgataaactatggtctcgaccctgacgaagat
attctctttatcaaggaacaaattaagggaccagatccaaagacaccgaacaaagactct
ttgtggccctataaaggacgtcctatcgagaagagcttcctctatgagatagtagctaac
aaaagaaatggcatcgatgtggacaaatgggattactttgccagagactgtcaccatctt
ggaatcaaaaataattttgattacaaacgctatgtcatgttttcccgtgtctgtgaagtg
gaagacagtgaaggtggctataagatgaagcacatctgcaccagggaaaaggaggttgga
aatctgtacgacatgttctacacacgcagcagcttacaccgcagagcttatcaacataaa
atcagcaacctcatcgatataatgatccaagaggccttcatcaaagcagacccctatgtg
gagattataggggccgaggggaagaagtacagtatctctacagctattgatgacatggta
gccttcactaagctgacggataacatttatctggagattttaaactctactgattcacgg
ttgtctgaggcacgaagtattttaaggaacatcgaacgccgtgatctatacaagtatttg
ggtgagacccagccaaacggtcagcgcaagattagaaaggaagagtacgaacagcttccc
cgagagattgttaacaccaaacctgatgtgcacctggaagcccaactgaaggccgaagat
ttcatagtggatgttctcaacatggattatgggatggaagacaagaatccaattgaccat
gttctcttctatagtaaaaataacacaaggcaagcagtcaagatctctaaagaacaggtg
tcacagcttctgccacagaaatttgcagagcagcgcattcgagtatactgtaagaagaaa
gacagaaagagcctatatgctgctcggcagcatttcattcaatggtgtgcggacagagac
ttcaccaaaccacaggatggtgacatcatggccccacttataactcctctgaaatggcag
aaggatgatccaggttgccaccaagaagcatccaaagtcagagtacaactaaattttaac
tga
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