Arvicola amphibius (Eurasian water vole): 119815819
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Entry
119815819 CDS
T08327
Symbol
Chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119815819 (Chd6)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119815819 (Chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
CHDCT2
HDA2-3
MUN
DUF2861
Motif
Other DBs
NCBI-GeneID:
119815819
NCBI-ProteinID:
XP_038188046
LinkDB
All DBs
Position
5:17344794..17522882
Genome browser
AA seq
2706 aa
AA seq
DB search
MKMKIQKKEKQLSKLKSLSHSPMSDASVNFDYKSPSPFDCSTDQEEKIEDVANHCLSQKD
LYSTEEEADTLFSRKLISHNGMEDSGGRGTGVKKKRKKKDPGEQEGTKGSKDKEPKPKRK
REPKEPKEPRRAKEPKRAKEPKEAKQKDGVKKPRKPREASGTKEAKEKRSCTDYVSRTKS
KKASKEQGLTPVERKKKGKRKNETTVESLELDQSLPNSTLRSPEEPTESTDSQKRRSGRQ
VKRRRYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASK
TVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHI
FTEPDEDLFNPDYIEIDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPA
KVKEFESLQVLPEVKHVERPASDAWQKLETSREYKNSNRLREYQLEGMNWLLFNWYNRKN
CILADEMGLGKTIQSITFLSEIFARGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG
SQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH
RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD
LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF
LTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSSEASDFQLQAMIQA
AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAA
IDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKA
VKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKGSTNGVQQLSKMEVEDLLRKGAY
GALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPN
FWQKWAKIAELDTEANNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTR
SRRLSDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYC
VKHYKGDEKIKSFIWELITPSKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKNA
DWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYFLKAEILGEAADKAFEGTPARELD
VPLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLERVGMPDEKSLS
AEQGVTDGTPDIPERGNIDKEDSAEDKLDGLQKQTASPSDGSDGIFGEKKDDSQAAQDGS
NPDKSPWPVPSALTARLRRLVTIYQRCNRKELCRPEILGPGNQGYWVQEEVFRRTSEMDL
INKEAQKRWTRREQADFYRTVSSFGVVYDQEKKAFDWTQFRIISRLDKKSDESLEHYFYS
FVAMCRNVCRLPTWKDDGSSDANIYVEPITEERAAKTLYRIELLRKVREQVLRCPQLHER
LQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRT
DTQAPGSLCCLYQNNSKLYESLTYSQMRRTSESLESEPENLVKMENRDDHLCLPEGSLSD
ITCENLISKVQEVISIDHDESLLPESLESMMYGKTGLSQEPLSFQETPSTNTQSRKDTVT
VSASRDESCQPAGIEAEIASNSLMSSLEAGVAKMNIKNGKHLLISISKEGEPCCSETEQR
TESTGHLEAKCLSPTLDTGHESGFVDLCSLSVCDSRRKMSSDQQLIDLLENKSLESKLIL
SQNQSDEEEEENEDETLAVVASTTEKPEGLHFTRPNANIPRGKNLCFHQDEAKKGSLEVV
SQTPGPQRAVPPPAWHRHCKHMERWAHGLGSEELTAHQPDLYRSKANDAAVEGEPAIIPT
EPFKLKPELLKEPWKESAEGGKSFSMYVPEGIEPKPEDMDFETKDDYEKDGTCHSQDYPG
KYSEEESKSSTSGIAGDLGEEAQEVRAPTIAQLLQEKTLYSFSEWPKDRVIINRLDNICH
VVLKGKWPSSQQYEPSGALPTPILTSSAGSRNSLSEPEAAEHGFSSGAALAAQIQKESFL
APVFTKDEQKHRRPYEFEVERDAKARSLEQYSATHGRPPIVLNGWHGESAIDLSCSSEGS
PGATSPFPVNTSTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIVNGSLRRDDAAMRR
RRGRRKHIDGGMDLIFLKEQTLQAGILEVHEDSGQTTLSTTHPEGPGAASSAPEPAAAND
QTEKTAPSKSLLDWLRQQADYSLDVPGFGASFSDKPKQRRPRCKEPEKLDITSLSGEERV
PAVPKEPGLRGFLPESKFNHTLAEPVLRDAGPRRRGRRPRTELLKAPAIVADSPSGMGPL
FMNGLIAGMDLVGLQNVRNIPGIPLTGLVGFPAGFATMPTGEEVKSTLSMLPMMLPGMAA
VPQMFGVGGLLNTPMATTCTTTASASLSSTTKSGTSATDNTTEDKLSGREGKADALVEDK
SAPGPFPDQSEPTITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPAMQQGRHSEM
VSPESQKRKKKKTKGDNANPEPASGCEREPDSDQNCTEFSTTLPPEREHVVQAGKGGLKD
SSDDTN
NT seq
8121 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaaatacagaagaaagagaagcagttgtccaagttaaaatctttgagtcac
tccccaatgtcagatgcctctgttaattttgattacaaatcaccgtcaccatttgactgc
agcactgatcaggaagagaaaatcgaagatgttgccaatcactgtctgtcccagaaggac
ctttattctactgaagaagaagctgatacccttttctctaggaagttgatatcccataat
gggatggaggatagtgggggcagaggtactggagtgaagaagaaacggaagaaaaaggat
ccaggagagcaagagggaacaaagggaagcaaggacaaggagcccaagccaaagaggaaa
cgagaacctaaagagccaaaagaacccaggagggccaaggagccgaagagggccaaggag
cccaaggaggcaaagcagaaggatggtgtgaagaagccccggaagccccgggaggcctct
ggtaccaaggaggctaaagagaagaggagctgcactgactatgtatccaggacgaagtcc
aagaaggccagcaaggagcaaggactaactccagtggagagaaagaagaaaggaaaaagg
aaaaatgaaaccactgtggagagtttagagctggatcagagtttgccaaactcaaccctg
cggagtcctgaggagcccaccgagtctacagacagccagaaacggcgctcaggacgacaa
gtaaaacgcaggagatacaacgaggatcttgacttcaaagtggtggatgatgatggggaa
acaattgctgtcctgggagctggccggacatctgcgctctctgcttctacactggcctgg
caggcagaggagcctccagaagatgacgcaaacatcattgagaagatcctggcatctaag
actgtccaggaggttcacccaggagaacctccatttgacctagagctgttctacgttaag
tatagaaatttttcctatttacattgtaaatgggccacaatggaagagctggaaaaggat
ccccgcatcgcacagaagatcaagcgatttaggaacaaacaggcccagatgaagcacatt
tttactgagcctgatgaagacttgttcaatccagactatatagaaattgaccgtatctta
gaggtggcccacaccaaggatgcagaaacgggggaggaagtgacacattacctggtgaaa
tggtgctccctgccatatgaagaaagcacatgggagctagaagaagatgtggatcctgca
aaagttaaagaatttgagtctctacaagttctccctgaagttaagcacgtggagcgaccc
gcttctgacgcctggcagaagctggagacatctcgtgaatataagaacagtaaccggctg
cgggagtaccagctggaggggatgaactggcttcttttcaattggtacaacagaaaaaac
tgtattttggcggatgaaatgggcctagggaaaaccatccagtccatcacattcctttca
gaaatattcgccaggggaatccatggtccttttctcatcattgcacctctttccaccatc
actaattgggagcgagaattccggacgtggacggaaatgaatgctattgtgtaccatggc
agccagatcagcaggcagatgattcagcagtatgaaatggtgtacagggacgcacaggga
aaccccctttcaggagtcttcaagttccatgtcgtcatcacaacatttgagatgatcctg
gcagattgcccagagctgaagaagattcactggagctgtgtgataatcgatgaggcccac
agactgaagaacaggaactgcaaacttctggaggggctaaagctcatggccctggaacac
aaagtgctgctcacaggaacacccttgcagaactctgtggaagagctcttcagtttgctt
aactttctggagccctcgcagtttccttcagagactgctttcttagaggagtttggcgat
ctcaaaacagaagagcaggtaaagaaattgcagtctatcttaaaaccaatgatgcttcgg
cgcctgaaagatgatgtggaaaagaaccttgctcccaagcaagaaaccatcatcgaagta
gaactgaccaatatccagaaaaagtactaccgtgccatcctggagaagaacttttccttc
ctgaccaaaggcgcaaatcagcacaacatgcccaatcttatcaatactatgatggaacta
agaaaatgctgcaaccacccctacctgatcaatggggcagaggaaaagattctggaagat
ttccggaaagcccacagctctgaggcctctgacttccagctgcaggccatgatccaggcg
gccgggaagctggtgctgattgacaagctgctccccaaactgatcgcaggtggccacaaa
gtgctcatcttctctcagatggtgcgctgtctcgacatcctggaagattatctcatccag
aggagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggcagcc
atcgaccggttctgtaagccagactcagaccgctttgtttttcttctgtgcaccagagca
ggaggcctagggatcaatctcacagctgctgatacctgcatcatatttgattctgactgg
aacccacaaaatgacttgcaggctcaggcccggtgtcatcggataggccagagcaaagcc
gtgaaggtgtatcgcctaatcactcgaaactcctatgagcgggaaatgtttgacaaggcc
agtctgaaactaggcctggacaaggctattcttcaggacatcaacagaaagggcagcacc
aatggggtacagcagctctcaaaaatggaagtggaggacttactccggaaaggtgcttat
ggggctttaatggatgaagaagatgaaggctccaagttctgtgaagaagacatagaccag
attctgcaaagaagaactcataccatcactatccagtcggaggggaaagggtccactttt
gccaaggctagttttgtggcttcaggaaacagaacagatatttccttggatgatcctaat
ttttggcagaaatgggctaaaatagctgaattagacactgaagcaaataatgaaaaggaa
agcttagtgattgaccggccacgtgtgaggaagcagaccaagcactacaactcatttgaa
gaggacgagcttatggagttctcagagctagacagtgactcagatgaaaggcccacgcga
tccaggcgcctcagtgacaaagccaggcgctacctccgtgccgagtgcttccgggtagag
aagaacctgctcatctttggctggggccggtggaaggacatcctgactcacgggcgattt
aagtggcacctaaatgagaaagacatggaaatgatttgccgggccctgttggtgtactgt
gtcaagcattataaaggagatgaaaagatcaagagttttatttgggagctaatcacacct
tccaaagacggacaagctcagaccctccagaaccactcagggttgtctgcccctgtcccc
agagggaggaaaggaaaaaagacaaaaaaccagctcttgctcccagaactgaagaatgca
gactggctagccacctgcaaccctgaggtggtcttacatgatgatggatacaagaaacac
ctcaaacagcactgcaacaaggtacttctgagagtccgaatgctatacttcctaaaagct
gaaatactgggagaagcagctgataaagcatttgagggaactcctgccagggaactggat
gtgcctctgcctgacattgactacgtggagatcccagtggattggtgggatgctgaggct
gataagtcccttctcattggcgtgttcaagcatggttacgagaggtacaatgccatgcgg
gctgacccagcactctgcttcctagagagagtcgggatgcctgatgagaagtccctgtct
gcagaacagggtgtcacagatggaaccccagacattcctgaaagaggcaacatagataaa
gaagacagtgctgaggacaagttagatggtctccagaagcaaacggcgagccccagtgat
ggaagtgatggcatttttggtgaaaagaaggatgacagccaggcagcccaggatggctcc
aacccagacaaatcaccctggccagttccatctgctctcactgctcgactccggcgtctg
gtcactatttaccagcgctgcaatcgcaaggagctctgccgacctgaaattctaggccca
ggtaatcaaggatactgggttcaggaggaggtgttcaggagaacttcagaaatggacctc
atcaacaaggaagcccaaaaaaggtggactagaagagaacaagccgacttctatagaaca
gtgtcttcctttggcgttgtgtatgaccaagaaaagaaagcctttgactggacacagttc
cgcatcatttcccgtttggacaagaagtcagatgagagcctggagcactatttttatagt
tttgtagccatgtgccggaatgtgtgtcgtcttcccacatggaaagatgatggttcctct
gatgccaacatctatgttgaacccatcactgaggagcgggcagcaaaaaccctgtaccgc
attgaactgctgagaaaagtccgtgagcaagtgctcaggtgtccacagctgcatgagcgc
ctccagctgtgcaggcccagcctctacctcccagtctggtgggaatgtgggaaacatgat
cgagacctgctcatcggcactgccaaacatgggctcaaccgcactgactattacatcatg
aacgacccccagttgtccttcctagatgcctatagaaactatgcccagcacaaaagaact
gacacacaggcacctggaagtctctgttgcctttaccagaacaattctaaactatatgaa
tctcttacttattcccaaatgaggaggacttcagagtccctggaaagtgagccagagaat
ctggtgaaaatggaaaacagagatgatcatctctgtctgcctgagggcagtttatctgac
ataacttgtgaaaacttgatttccaaagttcaggaggtcatttctatcgaccatgacgaa
agcttgctgcccgagtccttggagagcatgatgtatggtaagacaggactcagccaagag
ccactctcttttcaggaaaccccaagtaccaacacacagtccaggaaagatactgtcacc
gtctcggccagcagagatgagagctgccagcctgctggcattgaggcagaaatcgcttca
aactctctaatgagcagcttagaagcaggagtagctaaaatgaacattaaaaatggaaaa
catttgttgatctctatctcaaaagaaggggaaccctgctgcagtgagacagaacagaga
actgaaagcaccggccacctagaggccaaatgtttatcccctaccttagatacaggacac
gaaagtgggtttgtagatctgtgcagccttagcgtgtgtgactccagaagaaaaatgtca
tcagatcagcagttaattgatttattagaaaacaagagtctagaaagtaagttgattttg
agtcagaaccagagtgatgaggaagaggaagaaaatgaggatgaaactttagccgtagta
gcaagcaccacagaaaagccagagggcttgcatttcaccaggcccaatgcaaacatccca
aggggaaagaacctctgtttccaccaggatgaagccaagaaaggaagcctggaggtggta
agccagactcctggaccacagagggccgttcctcccccagcctggcatcgccactgcaag
cacatggaaaggtgggcacatggtctggggagtgaggaactcacggctcatcagccagac
ctgtacagaagcaaagccaatgatgctgcagtggaaggtgagcctgccattattccaaca
gagccatttaaactgaagcctgagcttttaaaagaaccatggaaagaaagtgcagagggg
ggaaagagtttctccatgtatgttcctgagggaattgagcccaaaccagaagacatggat
tttgagactaaagatgattatgagaaagatggaacctgccacagtcaagactacccagga
aaatactctgaggaagagagtaagagttcgacatcaggcattgcaggagaccttggggaa
gaggcacaggaagtacgggctcccaccattgctcagctgctgcaggagaaaaccttgtat
tccttctcagaatggccaaaggatcgtgtgataattaaccgcttagataatatttgccat
gtggtgttaaaagggaagtggccctccagccaacagtatgagccgtcaggtgcactgccc
acgccaattttaaccagcagtgctggttctcgaaacagcctctcagagccagaagcagca
gaacatggcttcagcagtggtgcagcattggcagcccagatccagaaggagagcttctta
gccccagtattcacaaaagatgaacaaaagcacagacgtccctatgagtttgaggtggaa
agggatgccaaagctcggagcctagaacaatactctgccacccatgggcgtccccccatt
gtcctcaatggctggcatggggagtcagctatagacctctcctgctcatcagaggggtcc
ccaggagccacatcccctttcccagtgaacaccagcacccctaagattggggctatcggt
tcacttcaaggagccctaggtatggacttgtctggaattctgcaagctggcctaatccac
ccagtaactggacagatcgtcaatggaagcctcaggagagacgatgctgccatgagaagg
cggagagggaggcgaaaacatattgacggagggatggacctcatctttttgaaggagcaa
acacttcaggctggaattctggaagtccatgaagattcggggcagactaccctaagcacc
acccaccctgaagggccaggagctgcttcctcagctcctgagccagcagcagccaacgac
cagacagagaaaactgctcccagcaagagcctgcttgactggctgcggcaacaagctgac
tactccttggatgtccctggctttggggcaagtttttcagacaaacccaagcagaggaga
ccacgctgcaaagaacctgaaaaattagacatcacctctctgagtggagaagaaagagtt
cctgctgtccccaaggagccaggactgagggggtttctcccagaaagcaaattcaatcac
accctagctgagcctgtgcttcgagatgcaggtccccgcaggagggggaggcggcctcgg
actgaactcctaaaagctccagccattgtggcagactctccctctggaatgggaccactg
ttcatgaatgggctgattgcagggatggacctggtaggattgcagaatgtgagaaatatt
ccaggcattcctctgactgggctggtgggcttcccagctggttttgctaccatgcctact
ggtgaagaggttaaaagcaccctgagcatgctacccatgatgctgccaggcatggctgca
gtgccccagatgtttggtgttggtggactcctcaacacacccatggcaaccacctgtacg
accactgcatcggcgtctctctcaagcacaacaaaaagtggtacctcagccactgacaac
actacagaggacaagctaagtggccgtgaaggaaaagcagacgctctggttgaagataag
tctgccccgggtccatttcctgaccagtctgaacccacgataactaccagtagtcctgtg
gctttcaacccgtttctcatcccaggagtgtctcctgggctcatctacccatccatgttt
ctttcccctggcatgggcatggctctgccagccatgcagcagggcagacactcagagatg
gtcagccctgagagccagaagaggaaaaagaagaaaacaaagggggataacgccaaccca
gagcctgcatctgggtgtgagagggagccagacagtgatcagaactgcaccgagttcagt
accactttgcctccagaacgagaacacgtggtacaggccgggaaaggggggctcaaagac
tccagtgatgataccaattag
DBGET
integrated database retrieval system
