Anguilla anguilla (European eel): 118223249
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Entry
118223249 CDS
T07545
Symbol
lig4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
118223249 (lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aang03400
]
118223249 (lig4)
Enzymes [BR:
aang01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
118223249 (lig4)
DNA repair and recombination proteins [BR:
aang03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
118223249 (lig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT_2
DNA_ligase_A_C
BRCT
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
118223249
NCBI-ProteinID:
XP_035265404
LinkDB
All DBs
Position
3:complement(17285767..17290436)
Genome browser
AA seq
938 aa
AA seq
DB search
MVLLTEEEKKSQTTSRCKLHSILDSWVSPVKMAAALDTKSGSEGSVAAEVPFHHLCTTLE
KIQKAKLRPDKTKCLRDFLDSWRKFHAALHKDNPNTTDSFYPAMRLIVPSFERERMAYGI
KENMLAKLYIDVLGLPENGPEAHKLLNYRAPTTSQGEAGDFALMAYFVLKKRCTSQGNLT
IKEVNDFLDSVALNIASKQKDLVKKNLLHLINHSTPLEQMWLIRIILKDMKLGMSKVLDV
FHRDATELYNVTTDLEKVCRQLHDPSVSLSEVSIGLFSAFRPMLAAGANVKQVEKQMTNR
SFFIETKLDGERIQVHKDGDVYKYFTRNSYEYTQQFGASPLQGSLTPFIHSIFKPHVRNC
ILDGEMMAYNLTVDAFIQKGTKFDIKRLVDDSELQTCFCVFDVLLLNDQKLGNETLKKRD
EMLQTVFTPIKGRMQLVQKTEAKTMQEVVDALNEAIDNREEGIMVKDPLSIYKPDKRGEG
WLKLKPEYMDGLMDELDLLIIGGYWGKGRRGGMMSHFLCAVAETPEPGEKPSVFHSFCRI
GSGYTMKELYDLGLKLAKHWKVYHKNDPPASILCTTEKPEVYIEPWDSVIIQVKAAEIVD
SDMYKTNCSLRFPRIERTREDKEWHQCMTLADLEQYRSKSSGKLASRHLLLNDDEPQKKK
RKLVAKPKKAIGIIDHFKAQDLSGVAKETDMFEDVEFCVLNGNDEHSKADLEKGVASCGG
IVVQNPGKDTYCVIAAVENMRVKNLIAADQHDVVWATWLLECLERKQVVPWQPRHMIHMS
PPTKEHFAKEYDQFGDSYSANTDEQQLKEVFGRIRVKEEDLPSIADVEARYRLDDLPTSM
FRPFRVYMDRCSDVGDPKSYIPSTCLDTRALEFRFHGGAVESTLVEGVSHVIVAEETRIM
PLRTLRRVFTKKFKIVRETWVKDCIKAGHLLNDNDYLV
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggttttgttaactgaagaggaaaagaagtcacagaccacttccagatgtaagttgcat
tcgattctagacagctgggtgtcacctgtcaaaatggcagcagcactggacaccaaatca
ggatctgaaggctctgttgctgctgaagtaccctttcatcatttgtgcaccactttggaa
aaaatacaaaaggccaaactcagaccagataaaactaagtgtctgagagacttcctggat
tcctggagaaagttccatgctgctctccacaaagataacccaaacactacagactcattt
tacccagctatgcgtctcatagttccctcgtttgagcgagagaggatggcctatggcata
aaggaaaacatgctggctaaactctacatcgatgttttgggtcttccggagaacggtcct
gaagcacataaacttctcaattaccgcgctcctactacatcgcaaggagaagctggggat
tttgcccttatggcctactttgttttgaagaaaaggtgcacaagtcaggggaatctaacc
attaaggaggtgaacgacttcttggactcggttgctctgaatatcgcaagtaagcagaag
gatttggtgaaaaagaacctgttgcacctgatcaaccacagcacacccctggagcagatg
tggctgatccgcataattctgaaagacatgaagcttgggatgagcaaagtcctggatgtc
ttccaccgcgacgcgaccgagctctacaacgtcaccacggacctggaaaaagtgtgccgg
cagctccatgacccctctgtgtccctcagcgaggtgtccatcgggctcttctcggctttc
aggcctatgctggcggcaggcgccaatgtcaaacaggtggagaagcagatgaccaaccgg
agcttcttcatcgagaccaagctggacggcgagcgcatccaggtgcataaggacggggat
gtgtacaagtattttacacgcaactcctatgagtacacacagcagttcggggcctcgcca
ttacagggttctctgacgcccttcattcacagtatcttcaagccccatgtgaggaactgc
atcttggatggtgagatgatggcatacaacctcactgttgatgccttcatacagaaaggc
acaaagtttgacattaagaggttagttgacgactctgaactgcagacctgtttctgtgtc
tttgatgtcttgctactcaatgaccagaagttgggaaatgaaactctgaagaagcgggac
gagatgcttcagacggtcttcaccccgataaagggccggatgcagctggtgcagaaaacc
gaagccaaaacaatgcaggaagtggtggacgccctcaatgaagcgattgacaaccgggaa
gaaggaatcatggtgaaggacccactgtccatctacaagccagacaaacgaggggagggt
tggctgaagctcaagccagagtatatggacggcctgatggacgaacttgacttgctgatc
atcggggggtactggggaaaaggcaggcggggtgggatgatgtcccacttcctgtgtgca
gttgctgaaactcctgaacctggagagaagccatcggtgttccattctttttgccgcatt
ggttcaggttacactatgaaggagctttacgacctgggcttgaaactggccaagcactgg
aaagtctaccataagaatgatcccccagcatcgatcctttgtaccacagagaaaccagag
gtgtacattgaaccctgggattctgtgatcattcaggttaaagcagccgaaatagtcgac
agtgacatgtataagacaaattgctcgcttcgatttcccaggatcgagaggacgagggag
gataaggaatggcatcagtgcatgactttagcggacctggagcagtacagaagcaagtct
tctgggaagttagcatcgagacaccttcttctcaatgatgatgagccacagaagaagaag
cggaagctagtggcaaagcctaagaaagccatcgggataattgaccattttaaggcacag
gacctgtctggtgtggcgaaagagactgacatgtttgaggatgtggagttctgcgtattg
aatgggaatgatgagcactccaaggccgatctggagaagggggtagccagttgtggaggc
atcgtagtccagaacccaggcaaggacacctactgcgtgatagctgctgtggagaacatg
agggtgaagaacctgattgccgccgaccagcatgacgtggtgtgggccacctggctgctt
gagtgcctggagaggaagcaggttgttccgtggcaaccccgtcacatgatccatatgtct
ccacccacaaaggaacactttgccaaggagtacgaccagttcggggacagctactcggct
aacacggatgagcagcagttgaaagaggtctttgggaggatccgcgtgaaggaggaagac
ttgccttccatcgcagatgtggaagcaaggtaccgcctggatgaccttcccacaagcatg
ttcagacccttcagagtgtacatggaccgttgctctgacgttggggacccgaagagctat
atcccttcgacatgtttggacacacgggcgctggagttccgtttccacgggggggcagtg
gagtccacgctggtggaaggggtgtctcacgtcattgttgctgaggaaaccagaatcatg
ccattaagaactctcagaagagtctttaccaagaagtttaagattgtgagagaaacctgg
gtgaaggactgtatcaaagctggacatttgttgaatgataatgactaccttgtttag
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