Arthrobacter alpinus R3.8: AOC05_17775
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Entry
AOC05_17775 CDS
T04095
Name
(GenBank) DNA glycosylase
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
aaq
Arthrobacter alpinus R3.8
Pathway
aaq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AOC05_17775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaq03400
]
AOC05_17775
Enzymes [BR:
aaq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AOC05_17775
DNA repair and recombination proteins [BR:
aaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AOC05_17775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
TECR_N
Motif
Other DBs
NCBI-ProteinID:
ALE93749
UniProt:
A0A0M3UH26
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Position
complement(3898987..3899799)
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AA seq
270 aa
AA seq
DB search
MPEGDTVWRAAKDLRTALAGQRLLACDLRVPAFATVDFTGSVVQSVQSCGKHLLMFVDGH
VIHSHLSMEGRWDLYPAPASGSPPHWRRPAHTARAVLRTGDVEAVGFSLGLLEVLPETGL
SNAVGHLGPDLLGPGWDADQALRRLLAEPERAIGLALLDQRNLAGIGNIYRNELCFLSRV
HPAATVAEVQDLPRMVELAKRLLEVNKNRSQRSTTGGPARGEAASWVYGLAGKPCKRCGA
LIRHATMADPAFPSWAARDIYWCPRCQVGP
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagggcgacaccgtatggcgggcagccaaggacctgcgcaccgccctggccggg
cagcgcctgcttgcctgcgatctccgtgtgcccgcatttgccacggtggacttcaccggc
agtgtggtgcagtcggtacaatcttgcggcaaacacctgttgatgtttgtggacggccat
gtgatccattcacacctgtccatggagggccgctgggacctctacccggcgcccgcctcc
gggtcaccgccgcactggcgccgcccggctcacactgctcgggccgtgctacgaacaggg
gatgttgaggcggtggggttttcccttggcctcctggaagtcctgcccgaaaccgggctg
agcaacgccgtcgggcatctgggacccgatctgctggggccgggctgggacgcggaccag
gcgctgcggcgactgctcgcggaacccgagcgggcgattgggttagctcttttggatcag
cgcaatcttgcagggatcggtaacatttaccggaacgagctgtgtttcctgagccgtgtt
catcctgctgcgacggtagcggaggtgcaagatctgcctcggatggtggaactagcgaaa
cggctgctcgaggttaacaagaaccgctcccagcgctcaacgacgggagggccggcgcgg
ggcgaggcggcatcgtgggtttatgggcttgccgggaaaccgtgcaagaggtgcggggcg
ctgatccggcacgcaacaatggcggaccctgcattcccctcctgggcggcacgggacatt
tactggtgtccgcggtgccaagttgggccgtga
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