Arcobacter aquimarinus: AAQM_2262
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Entry
AAQM_2262 CDS
T06604
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aaqi
Arcobacter aquimarinus
Pathway
aaqi03420
Nucleotide excision repair
aaqi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aaqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AAQM_2262
03430 Mismatch repair
AAQM_2262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaqi03400
]
AAQM_2262
Enzymes [BR:
aaqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AAQM_2262
DNA repair and recombination proteins [BR:
aaqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AAQM_2262
MMR (mismatch excision repair)
Other MMR factors
AAQM_2262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
eIF3_p135
AAA_11
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QKE26962
LinkDB
All DBs
Position
complement(2242222..2244276)
Genome browser
AA seq
684 aa
AA seq
DB search
MSENLLSSLNESQKIAAQHIDGPLLILAGAGSGKTKTITTRLAYLISIGIDPASILTLTF
TNKAASEMRERAFNMFDSSIINRLPLLCTFHKFGLLFLKFHMDELNRKNNFIIIDTDDKK
RVLKSMEKDIPAALLVSEISKYKNSLLTPTEAKKNAQLKLYEQIAQIYEDYENYLEKNNL
VDFDDLLLLPYKILKKNENLAKQISQKYQYIMVDEYQDTNELQYRLLRLLCSSHNNLCVV
GDDDQSIYGWRGATIKNILNFSEHFENTLVVKLEENYRSTDTILNHANQLIEHNRDRLGK
KLVGTRVKGDAIRVYESHDENEETRKIIEDIKSLINSGENPKNIAILFRVNALSRSLEEG
FNKAGLNYKLVGGMKFYERSEIKDLIAYFRLLTNSNDNFSVKRIINKPKRGLGKTTIDKL
EAKSIESGKSIFDLIQQLEADEISSLVGKKNARTLKVFEASVLDLKELLSESKMKFLDSF
EETFDYRASYDNLPDGFERQANIDEFYGYIRDYFIQNPNLDLKDFLNDIALESENDDYSG
EAVSMMSIHASKGLEFKKLFIVGMEEGFFPLTGDGSDLEEERRLGYVALTRAMDNLTLSF
VHSRFYKGKRTSLVKSRFLTESGLIKGSLTIEKQSGFKKGDLVSHKIFGMGRIEKAVNAG
KDYKLTINFGGTHRDILSSFVEKI
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaatttattatcatcattaaatgaatcacagaaaatagctgcgcaacatatt
gatggacctttacttatattagctggcgctggttctggaaaaactaaaactataacaaca
agattagcttatttaatctctataggaatagacccagcatcaatattaacacttactttt
acaaataaagctgctagcgagatgagagaaagagcttttaatatgtttgattcgtctata
atcaatagactacctttgttatgtacttttcataaatttggattgctttttttaaaattc
catatggatgaacttaatagaaaaaataattttattattattgatacggatgataaaaaa
agagtattaaaatcaatggaaaaagatattcctgcagctttattggtttcagaaatttca
aaatacaaaaattcattattaactccaactgaagcaaaaaaaaatgctcaattaaaactc
tatgaacaaattgcacaaatatatgaagattatgaaaattatttagaaaaaaataattta
gtggattttgatgatttacttttacttccatataaaatacttaaaaaaaatgagaattta
gccaaacaaataagtcaaaaatatcagtatattatggttgatgagtatcaagatacaaat
gaacttcaatatagactacttagacttttatgttcaagtcataataacctttgtgttgtt
ggtgatgatgatcaatcaatttatggatggcgtggagcaactataaaaaatatattgaat
ttttcagagcattttgagaatactttagttgtaaaacttgaagaaaactatagatcaaca
gatacaatattaaatcatgctaatcaattaattgaacataatagagatagattaggtaaa
aaattagtaggaactagagtaaaaggtgatgcaataagagtttatgaatcacatgatgaa
aatgaagagacaagaaaaataattgaagatattaaatctcttattaactcaggagaaaat
cctaaaaatatagctattttatttagagtaaatgcactttcaagatcacttgaagaaggc
tttaacaaagcaggacttaattataaacttgttggtggaatgaagttttatgaaagaagt
gaaataaaagatttaatagcatattttaggttattgacaaattcaaatgataatttctca
gtaaaaagaattataaataaaccaaagcgaggtttaggaaaaacaactattgataaactt
gaagctaaatctattgaatcaggaaaatcaatatttgatttaatacagcaattagaagct
gatgaaataagttcattagtaggtaaaaaaaatgcaagaactttaaaagtatttgaagct
tcagttttagatttaaaggagttgttaagtgaatctaaaatgaagtttttagatagtttt
gaagaaacttttgattacagagcttcatatgataatcttccagatggatttgaaagacaa
gcaaatattgatgaattttacggttatattagagattattttattcaaaatcccaattta
gatttaaaagattttttaaatgatattgctcttgaaagcgaaaatgatgattatagtggt
gaagctgtatctatgatgagtattcatgcttcaaaaggattggagtttaaaaaattgttt
attgttggaatggaagaagggttcttcccattaacaggagatgggagcgatttagaagaa
gaaagaaggttaggttatgttgcacttactagagccatggataaccttactttatctttt
gttcattcaagattttataaagggaaaagaacatctttagtaaaaagtagatttttaact
gagagtggtcttattaaaggtagtttaacaattgaaaaacaatcaggattcaaaaaaggt
gatttagtatcacataaaatttttggtatgggaagaatcgaaaaagctgtaaatgctggt
aaagattataaattgactattaattttggtggaactcatagagatattttatcttctttt
gttgaaaaaatataa
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