Azospirillum argentinense: D3093_20465
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Entry
D3093_20465 CDS
T08628
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
aare
Azospirillum argentinense
Pathway
aare02020
Two-component system
aare02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aare00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D3093_20465 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D3093_20465 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aare03021
]
D3093_20465 (rpoN)
Transcription machinery [BR:
aare03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D3093_20465 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_38
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
QCN97576
UniProt:
A0A4D8PGP5
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All DBs
Position
p1:complement(1389270..1390847)
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AA seq
525 aa
AA seq
DB search
MALSQRLDLRQTQSLVMTPQLQQAIKLLQLSNIELSDFVDREIEQNPLLERDGGPGEGGG
ESGGDGAGDGGGEPGAVDLAAPEERQPPMTDGRTRDTVEMTSSETMGSASDAPLDTDFEN
VYSDDRFSDGTDGSSDVYGSWQERGGRGGFEDDESNLEATLTGQKSLRDHLTEQLKIDLP
DLGDQLIGLALIDMLDEAGWITGLEVESLAGQLGCAPERVERVLAACQRFDPPGIFARSL
KECLAIQLREKNRFDPAMEALLDHLELLAARNLPALMKVCGVDAEDVADMVAEIRKLNPK
PALSFDHTPAQLVTPDILMRANPGGGWLIDLNPDTLPRVLVNHRYFARISGTARNKADKE
YITERFQSANWLVKSLHQRATTILKVASEIIRQQDAFFIHGVSHLKPLILRDIAEAIGMH
ESTVSRVTTNKFMATPRGVFELKYFFTSAIQGADGQAAHSAEAVRYRIKAMIDAEKPEDV
LSDDKIVEILRGEGIDIARRTVAKYREAMRIPSSVQRRRAKMSRM
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcagccaacgcctcgatcttcgtcagacccagtccctggtgatgactccgcag
ctgcagcaggccatcaagctgctgcagctgtcgaacatcgaactgtcggacttcgtggac
cgcgagatcgagcagaatcccttgctggagcgcgacggcggccccggcgagggcggcggc
gagtccgggggcgacggtgccggtgacggcgggggcgagcccggagcggtggacctcgcc
gcgccggaggagcgccagccgccgatgaccgacgggcgcactcgcgacaccgtggagatg
acatcgtcggagacgatggggtcggcctccgatgcgccgctcgacaccgatttcgagaat
gtctattccgacgaccgtttttccgatgggacggacggctccagcgacgtctacggctcc
tggcaggagcgcggcgggcgcggcggcttcgaggacgacgagtccaacctggaagccacg
ctgaccggccagaagagcctgcgcgaccatttgaccgagcagctgaagatcgacctgccg
gacctcggcgaccagctcatcggtctggcgctgatcgacatgctggacgaggccggctgg
atcaccgggctggaggtcgagagcctcgcggggcagctcggctgcgcgccggagcgggtg
gagcgggtgctcgccgcctgccagcgcttcgacccgccgggcatcttcgcgcggtcgctg
aaggagtgtctggcgatccagctgcgcgagaagaaccgcttcgacccggcgatggaggcc
ctgctcgaccatctggagctgctggcggcgcgcaacctgccggcgctgatgaaggtctgc
ggcgtggacgccgaggacgtcgccgacatggtggcggagatccgcaagctgaaccccaag
ccggcgctcagcttcgaccacacgcccgcccagctcgtcacccccgacatcctgatgcgc
gccaacccgggcggcggctggctgatcgacctgaacccggacactttgccgcgggtgctg
gtcaaccaccgctatttcgcgcgcatttccggcaccgcccgcaacaaggcggacaaggaa
tacatcaccgagcgcttccagtcggccaactggctggtcaagtcgctgcaccagcgcgcc
actacgattttgaaggtggccagcgagatcatccggcagcaggacgccttcttcatccac
ggcgtctcgcatctgaagccgctgatcctgcgcgacatcgccgaggcgatcggcatgcac
gagagcacggtcagccgcgtcacaaccaacaagttcatggcgacgccgcgcggcgtgttc
gagttgaagtatttcttcacctccgccatccagggggccgatgggcaggcggcccactcg
gcggaagccgtgcgttaccgcatcaaggcgatgatcgacgctgagaagccggaggacgtg
ctgtcggacgataaaatcgtcgaaatccttcgtggtgaagggatcgacattgcgcgtcgg
acggtcgcgaagtatcgtgaagcgatgcgaattccgtcatcggtgcagcgacgccgtgcc
aagatgtcacgcatgtaa
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