Aceticella autotrophica: ACETAC_00730
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Entry
ACETAC_00730 CDS
T09086
Name
(GenBank) DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
aaut
Aceticella autotrophica
Pathway
aaut03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aaut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ACETAC_00730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaut03400
]
ACETAC_00730
Enzymes [BR:
aaut01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
ACETAC_00730
DNA repair and recombination proteins [BR:
aaut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
ACETAC_00730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID:
QSZ27490
UniProt:
A0A975GAP1
LinkDB
All DBs
Position
147504..148427
Genome browser
AA seq
307 aa
AA seq
DB search
MSMMDERISPMLASSGEPFENPDWIYEIKWDGSRTIAFLSDKTRLQDRRLVDITYQFPDL
SLLHKHIKAREAILDGELIVLKNGKPSYKSIMSRKYQQNLIKINLLSKTMPAVFITWDIL
YLDGKPLIELPLIERKSYLKKVFKQSEIVKISDFIFEHGKILFEETGKKGLEGVMAKKAD
SKYLIGKRSRLWLKLKHFIVLNAVIIGYRTDKTALILGLYDDENNLIQIGSCESGLSNKE
LSAFYEVIDNIKVLDDYYKYKEKNVQWLKPILTCKVRFMEWSENMKMRAPSFIQFEHNVR
PEECRFE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgatggatgaaagaatatcccctatgctggcatcatctggtgaaccatttgaa
aatcctgattggatatatgaaataaagtgggacggctccagaacaatcgcttttctttca
gataaaacgcgccttcaggatagaaggcttgttgatataacttatcaatttcctgatcta
tcattacttcacaaacatataaaagcaagagaagcaatacttgacggtgagcttattgtt
ttaaaaaacgggaaacccagctataaaagcattatgtcaagaaaatatcagcaaaattta
ataaaaataaatcttttaagcaaaacaatgcccgctgtttttataacctgggacatacta
tatctcgacggcaaaccacttattgagttgccattgattgaaagaaaatcctacctgaaa
aaagtatttaaacaaagcgaaattgtgaaaatatctgattttatatttgaacacggaaaa
atcctttttgaagaaacgggtaaaaagggtctcgaaggagttatggccaaaaaagctgat
tcaaaatatttgataggcaaaagaagcaggctttggctaaaactcaagcactttattgta
ttaaatgctgttattattggatacagaacggataagactgctcttattttaggactttat
gatgatgaaaataatctgatacagatcggaagctgtgaatccggtctatctaataaagaa
ctatcggcattttatgaagttatagataatataaaagttttagatgattattacaaatat
aaagaaaaaaatgtacagtggttaaaaccaatacttacatgcaaagtcaggtttatggaa
tggtctgaaaatatgaagatgagagctccttctttcattcaatttgagcataatgtcagg
cctgaagaatgcagatttgaataa
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