Paracidovorax citrulli: Aave_1174
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Entry
Aave_1174 CDS
T00451
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
aav
Paracidovorax citrulli
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aav03009
]
Aave_1174
Enzymes [BR:
aav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Aave_1174
Ribosome biogenesis [BR:
aav03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Aave_1174
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Orexin
Motif
Other DBs
NCBI-ProteinID:
ABM31766
UniProt:
A1TLC8
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All DBs
Position
1297042..1298241
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AA seq
399 aa
AA seq
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MGVSICQPGRAACRPSQATGLQSARTTPVGIDLPVRRVGPGGLNSRKINHLHNVAQVKHI
IGAKPAPGRPPAASEPGALAVRWVEVDAESAGQRLDNFLIRELKGVPKTHVYRIIRSGEV
RINKGRAAADTRVEAGDVVRVPPVRISDKVAAKAERPAPAREFPLLLEDEHLVALDKPAG
VAVHGGSGVSFGVIEQLRQARPQARFLELVHRLDRETSGILLVAKKRSALTHLQDQFRER
ETGKTYLALVSGEWPERLKVIDAPLHKYLQADGERRVRVTTEDDPDGMRSITLVKVRSRV
PARPAEGLPAMALLEVTIKTGRTHQIRVHLASRGHPIVGDDKYGDFDLNRRVQKHGLRRM
FLHAWRLQFSHPASGERIELHAELPAELSGFLPAAPAPT
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
ttgggtgtttcaatttgtcagccgggccgggcggcatgcaggccttcgcaggcaaccggc
ctgcaatctgcgcgcacgacgcccgttggcatcgaccttcctgtacgtcgtgtcgggccg
ggtggactaaactccagaaaaatcaaccacttacacaacgtcgcacaggtgaaacacatt
ataggggccaaaccggcgcccggccgcccccccgccgcctccgaaccgggtgccttggcc
gtgcgctgggtcgaggtcgatgccgagtccgcggggcagcggctggataactttctgata
cgtgaactcaagggcgtgcccaagacgcatgtctaccgcatcatccgcagcggcgaggtc
cgcatcaacaaggggcgggccgcggccgacacccgcgtcgaggccggtgacgtggtccgc
gtgccacccgtgcgcatttccgacaaggtggccgcaaaggcggaacggcccgcaccggcc
agggagtttcccctgctgctggaggacgagcacctggttgccctggacaagcccgccggc
gtggcggtgcatggcggcagcggcgtgagcttcggcgtcatcgagcagttgcgccaggcg
cgcccgcaggcccgtttcctggagctggtgcatcgcctggaccgggaaacctcgggcatc
ctgctcgtggccaagaagcgttcggcgctcacgcacctgcaggaccagttccgcgagcgc
gaaaccggcaagacctacctggccctcgtgtcgggcgagtggccggagcgcctgaaggtc
atcgacgcacccctgcacaagtacctgcaggccgacggcgagcgccgggtgcgtgtgacc
acggaagacgatcccgacggcatgcgctccatcaccctcgtgaaggtgcgcagccgcgtg
ccggcccggccggccgaggggctgcccgccatggcgctgctggaggtgacgatcaagacc
ggccgcacccaccagatccgggtccacctggccagccggggccacccgatcgtgggcgac
gacaagtacggcgacttcgatctgaaccgccgcgtccagaagcacggcctgcgccgcatg
ttcctgcatgcatggcggttacagttcagccaccccgccagcggcgagcgcatcgaactg
catgccgagctgccggcggagctgtccggcttcctgcccgccgctcccgctcccacctga
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