Paracidovorax citrulli: Aave_3234
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Entry
Aave_3234 CDS
T00451
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
aav
Paracidovorax citrulli
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aav03000
]
Aave_3234
Transcription factors [BR:
aav03000
]
Prokaryotic type
Helix-turn-helix
Other families
Aave_3234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
PAS_4
HTH_30
HTH_23
AAA_5
Mg_chelatase
HTH_22
AAA_16
HTH_Tnp_ISL3
HTH_29
AAA
HTH_28
HTH_7
HTH_AsnC-type
HTH_20
TetR_N
HTH_50
P22_Cro
HTH_IclR
HTH_17
HTH_38
AAA_2
HTH_1
TrmB
Phage-MuB_C
HTH_11
HTH_Tnp_IS1
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ABM33796
UniProt:
A1TS58
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Position
complement(3564031..3566130)
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AA seq
699 aa
AA seq
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MQSSLHGGAAAQAAAFAPLPSARVIAESHERSRSFGLHRHASADLQPLAPDALAWAVARN
DALCAHALPVMETLSAQIAGTQSMVLLTDAQGVVLHALGDEEFLGRAQRVALRPGGTWSE
RSKGTNAIGTALALGDAVQVNGDEHFLAANQFLTCSCAPICDPLGQVIGALDVSGDRHQQ
SAHTLALVRMSARMVENHLFGKVYEDAVRLRFHARPEFLGTLVEGLAAFTPEGRFLAANR
SGQFQLGMSANALQAQTFPSLFGMPMSALLAHARGAMPRPLQLALPGGVVVNAMVEFRPK
GAAALGWTGQGSDEDTPVPGPVAPASATARAARRPIAPVPAGGPRLSGLRYLDTGDAQLA
QVIDRVSRVLGSDVPMLILGETGTGKELLARAIHQDGPRARGPFVAVNCASIPETLIEAE
LFGYEEGAFTGARRRGSVGKIAQAHGGTLFLDEIGDMPLAMQARLLRVLQERTVAPLGSA
RQIPVDVHVLCATHRNLRDMMVRGLFRDDLYYRLNGLVVRLPALRERSDLRVIVQRLLQA
QDREQAAEGSTPGWQRPRRTVPLQVASRAMDLFLRHRWPGNLRQLSNALRTAALMAGDAD
EIDIGHLPEDLFDEGLPTAGDAVPGASARDAEPSPSVRSAAHRPAPAAVRSWDETVEDAL
RHALSVHGGNVSAVARALGVSRNTVYRRLKSMDGTAAHH
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctccctccatggcggggcagcggcgcaggccgccgccttcgcgccgctgcct
tcggcccgcgtcatcgccgagtcgcacgagcgctcccgctccttcggcctgcaccggcat
gcatccgccgacctccagcccctggcgcccgacgcgctcgcctgggccgtggcgcgcaac
gacgccctctgcgcacatgcgctccccgtcatggaaaccctctccgcgcagatcgcgggt
acgcagagcatggtgctgctcaccgacgcccagggcgtggtgctgcatgccctgggcgac
gaagaattcctcgggcgcgcccagcgcgtcgcgctgcggcccggaggcacctggtccgag
cgcagcaagggcacgaacgccatcggcacggccctggccctgggtgacgcggtgcaggtg
aacggcgacgagcatttcctggccgccaaccagttcctcacctgctcctgcgcgcccatc
tgcgacccgctgggccaggtgatcggcgcgctcgacgtgagcggtgaccgccaccagcag
agcgcccacacgctggccctggtgcgcatgtccgcccggatggtggagaaccatctcttc
ggcaaggtctatgaggacgcggtgcggctgcgcttccatgcgcggccggagttcctgggg
acgctggtggaggggttggccgcgttcacgccggagggccgtttcctcgcggccaaccgc
agcgggcagttccagctcggcatgtcggcgaacgcactgcaggcgcagactttcccgtcg
ctcttcggcatgccgatgagcgcgctgctggcccatgcgcgcggcgccatgcccaggccg
ctgcagctcgcgctgccgggcggggtggtggtcaacgcgatggtggagttccgcccgaaa
ggggccgcggccctcggctggacgggtcaggggagcgacgaggacaccccggtgcccggg
cccgtggcaccagcttccgccacggcaagggcggcccgcaggcccatcgccccggtaccg
gccggcggtccgcggctgtccggcctgcgctacctggacacgggcgatgcgcagctggcg
caggtgatcgaccgcgtctcgcgcgtgctgggcagcgacgtgcccatgctcatcctcggc
gagaccggcacgggcaaggaactgctggcccgcgccatccaccaggacggcccgcgcgcg
cgcgggcccttcgtggcggtgaactgcgcatcgatcccggaaacgctgatcgaggccgaa
ctgttcggctacgaagagggcgccttcaccggcgcgcgccgcaggggcagcgtgggcaag
atcgcccaggcgcacggcggcacgctgttcctggacgagatcggcgacatgcccctggcc
atgcaggcccggctgctgcgcgtgctgcaggagcgcaccgtggcgccgctggggtcggcg
cgacagatcccggtggacgtgcacgtgctgtgcgccacccaccgcaacctgcgcgacatg
atggtccgggggctgttccgcgatgacctgtactaccggctcaacgggctggtggtgcgc
ctgccggccctgcgcgagcgttcggacctgcgtgtcatcgtgcagcgcctcctgcaggcg
caggaccgcgagcaggctgccgaaggctccacgccggggtggcagcgaccgcgccggacg
gtgcccctgcaggttgcgtcccgggccatggatctgttcctgcggcaccgctggccgggc
aatctgcgccagctctcgaatgcgctgcgcacggcggcgctgatggccggcgatgcggac
gagatcgatatcgggcacctgccggaggatctgttcgacgagggccttcccacagccggc
gatgccgtgcccggggcatcggcgcgggacgccgagccgtccccgtccgtccggagtgct
gcgcaccggcccgcaccggctgcggtgcgctcatgggacgagaccgtggaagatgcgctg
cgccatgcgctgtcggtgcatggcggcaacgtgtccgccgtggcgcgggcgttgggggtg
tcgcgcaatacggtgtaccggcggttgaaatccatggacggaacggccgcccatcattga
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