Alteromonas stellipolaris R10SW13: AVL56_19705
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Entry
AVL56_19705 CDS
T04403
Symbol
rph
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
aaw
Alteromonas stellipolaris R10SW13
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aaw03016
]
AVL56_19705 (rph)
Enzymes [BR:
aaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
AVL56_19705 (rph)
Transfer RNA biogenesis [BR:
aaw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AVL56_19705 (rph)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AMJ96322
LinkDB
All DBs
Position
complement(4609227..4609940)
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AA seq
237 aa
AA seq
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MRPSGRTANQIRPVTITRQYTCHAEGSVLVEFGNTKVLCNATVEEGVPRFMKGQGKGWIT
AEYSMLPRATHTRSGREAARGKQGGRTLEIQRLIARSLRAAVDLKLLGENTITLDCDVIQ
ADGGTRTASITGACVALVDALTYMRSKGILKANPLKHMIAALSVGIYKGTPIADLEYTED
SVAETDMNIVMTETGKLIEVQGTAEGEPFAFEELDEMLTIAKHGLRELFDIQKAALA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccaagcggcagaaccgccaatcaaattcgcccagttactattactcgtcagtac
acttgtcacgctgaaggctcagtgctggtggagttcggcaacactaaggtgttgtgtaac
gctacggttgaagaaggtgtgcctcgtttcatgaagggccaaggtaaaggctggatcacg
gcggaatacagcatgctacctcgcgctactcatactcgtagtggtcgtgaagctgcacgt
ggtaagcaaggtggccgtacgctagaaattcaacgtcttattgctcgctcgcttcgtgcc
gcagtagatttaaaactattgggcgagaacaccattacgcttgattgtgatgttattcaa
gctgacggcggaacacgtactgcctctattacaggtgcatgtgtggccttggttgatgcg
ttaacgtatatgcgcagtaaaggtattttgaaagcgaatccactgaagcacatgattgcg
gcattgtcggtaggtatttacaaaggtacgcctatcgctgaccttgagtataccgaagat
tcagttgctgaaactgacatgaatatcgtcatgacagaaacaggtaagcttattgaagta
caaggtactgcagaaggcgaaccgtttgcgtttgaagagcttgatgaaatgctaactatt
gctaagcacggcttgcgtgaattgttcgacattcaaaaagcagcactggcgtaa
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