Croceibacterium atlanticum: WYH_03297
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Entry
WYH_03297 CDS
T03925
Name
(GenBank) Outer membrane lipoprotein Omp16 precursor
KO
K20276
large repetitive protein
Organism
aay
Croceibacterium atlanticum
Pathway
aay02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aay00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WYH_03297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
GramPos_pilinBB
OmpA
Motif
Other DBs
NCBI-ProteinID:
AKH44316
UniProt:
A0A0F7KYJ2
LinkDB
All DBs
Position
unnamed:17025..23039
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AA seq
2004 aa
AA seq
DB search
MVDDPLPAGISSASWTCGGATGGGACGQASGSGAISGRTVDLPVGASVTFSMTLQIPAGY
SGDLTNIATVTAPGTALETDLTNNSATDVDAGVVVTKTLIGENGVLANLAEPGEQLTYRI
TVTNNGSVAVSGYDVIDTLDPNTSLVMATGGGILNGSNVEWTNLSIPPGGSLSVLLMTRI
DDPLPSTLTRITNIARHPDGPVPSCPSGQCVVTPVAPAVTYAKSTTATNAAVGDVITYTL
TARVFHSPTTDDLTLTDTLGSGLDFTAVTNAGAFTCTPGSPLVCTLPSGTAVGTYSLAYT
ATVNASATGSVTNAVVGTGGDDPSCSGTCDTDTPVVAPDVTFAKSADTAGPVSTGDIITF
TLTTTITNSLITSDIVLLTDTLGTGLDFTAVTDAGIYGVDSTGDPVIEFTLPAGTGPGSY
SVSYTAIVAPDATGSVSNVVVGSGPDNPTCTTACGTETTVADPVVTYGKSVSAPGATVAV
GDVLDYTLSVTVANSPTTGIVTLTDTLGTGLDFTAVTDAGVFTCNAANPLICTLAAGTPV
GTYDMTYTATVNDDATGSVTNAVVGTGDDDPGCDGTCDTATNVTPSQVTYAKSTSATNVS
VGDTITYTLSATVTNSQTTDDLTLTDTLGTGLDFGSVTNAGVFTCTPGNPLSCTLPAGTA
VGTYSLAYTATVNAAATGSVTNAVLGTGGDDPACLGSCDTTTTVDEPAVAYAKFADTAGP
VSAGDVITFTLRTTIANSMTTSDIVLLTDTLGAGLDFTAVTDAGAYGVDASGAPVVEFTL
PAGTGPGTYDAVYTATVTADASGAVSNAVVGTGGDDATCSGDCDTDTSVVAPGVTYAKTA
STAGPVSAGDVITYTISTIVANSQTTGDVVLADTLGSGLDFTAVTDAGAYGVDASGAPVV
EFTLPAGTAPGTYEVSYTATVNGSASGSVSNAVVGTGDDDPTCTVNCGTQTAVEDPTVTY
TLSATVANAATNNVLTLTDTLGTGLDFGSVTDAGAFTCTPGNPLVCTLPAGTAPGTYSLT
YNAEVNASATGSVNNAVLGTGGDDPACLGDCNIDTPVIAPAVSYAKTASTAGPVSVGDVI
SFTLTTTIANSMTTSDLVLLTDTLGTGLDFTAVTDAGAYGVDASGAPVVRFTLPAGTGPG
SYAVTYTATVNGSASGSVSNVVVGSGGDNPVCTVNCGTETTVEDSTVTYSKSSSAAQVQV
GDSISYTLTATVGNSALTDALTLTDTLGTGLDFVAITDAGVFTCTPGNPLVCTLPAGTAP
GTYSLAYTATVNAAAGGSVTNAVLGTGGDDPACLGDCITENPVAAPVISIAKTSDPAAGE
TVQVGQTVNYALVATIANGAITAPLVLVDTPDPGLTITDIPAGCEMAGGIITCTLPAGTP
AGTHSLAYGATINDSAGDAVRNVVTATGGGGTTEPGCNSCATEHNVALPLIRLAKTAAVR
EVRIGDLVRYTLSIENVGERDLIGGSIMDMPPAGFTYVEGSLQVVDGDNAATLSGQGPLR
FGEIDVRAGETATLAYLMRVGAGVRPGTHVNQAQAYSAEDVSVSNPATARVELAGDPLVD
ETLIFGTLFDDRDGDGWQDSAALSGLHVRGGFAPGAYVPGSTMIDRGQGMVPVPDASAPL
LHGMDLGGIAARQSEADPAGRNRIVIRQRLTDAAFTDDFILTSAQGVTIRMDAQGRTSVE
KGGDAAKGLNGAEPRVERRIAQGEGGHVVDYVIENDGIDERGIPGVRIASVEGLVMETDQ
FGRYHLAAVPGGAWARGRNFILKVDPSTLPDGAEFTTDNPLLRRITPGIPVRFDWGVKLP
PALVEGRTETVELELGQAIFTPGSAEIRAEYLPAIDRMAAEIGKYQGGEIVIEANGENAS
LAFDRAEAVKTILLRKLDTASARNLAITARGRVDDPSSLIAGVDEGGVLLGTVLFDTDSA
QIRPEFAPLLGRVAARLAREGGGAVAIIGHTDLRGSFQYNTALGMRRARAVYEALASQLP
PDIRAKIRVDSSEDPAAPADGQAG
NT seq
6015 nt
NT seq
+upstream
nt +downstream
nt
gtggtggacgatccgcttccggccgggataagttcggcaagctggacctgcggcggcgcc
actggcggcggggcctgcgggcaggcgagtggcagcggcgccatttcggggcggacggtg
gatctgccggtgggcgcttccgtcaccttctccatgacattgcagataccggcgggctat
tcgggcgatctcaccaatatcgccaccgtcacggcgcccggtaccgcgcttgaaaccgat
ctgaccaacaatagcgcaaccgatgtggatgccggggtcgtggttacgaaaacactgatc
ggcgagaacggcgttctggcaaacctggcggagccgggcgagcagctgacttaccggatc
accgtaaccaataatggcagtgtcgcggtaagcggctatgatgtcatcgatacgctggac
cccaatacgagcctggtcatggcgacgggtggcggcattttgaacggcagcaatgtggaa
tggaccaacctgtccattccaccgggcggttcgctctccgtcctgctcatgacccggatt
gacgatccgctgccatccacgctgacccggattaccaatatcgcccgccatccggacggg
ccggttccctcctgcccttcgggccaatgcgtggtcacgccggtggcgccggccgtcacc
tatgccaagtccacgacggcgaccaatgccgcggtcggcgatgtgattacctatacgctg
acggcccgcgtgttccattcacccacgaccgacgatctgacgctgaccgatacgctgggc
agcgggctggatttcaccgccgtcaccaatgcgggcgccttcacctgcacgccgggcagc
ccgctggtctgcacgctcccgtcagggacggcggtgggcacttacagcctggcatatacc
gccacggtgaatgccagcgcgaccggcagcgtgaccaatgccgtggtcggcacgggcggg
gatgatcccagctgttccggcacttgcgatacggacacgcccgttgtcgccccggatgtg
accttcgccaagagtgccgacacggcaggcccggtttccaccggcgatataatcactttc
acgctgacgaccacgatcaccaattcgctgatcacgtcggatatcgtactgctgaccgat
acgctgggcacggggctggatttcaccgccgtgaccgatgcgggcatctatggcgtggat
agcaccggcgatccggtgatcgaattcaccctgcctgccggaacggggccgggcagctat
tccgtcagctacaccgccatcgtcgcgccggatgcgaccgggtcggtcagcaatgtcgtg
gtcggatcggggccggacaatcccacatgcaccaccgcctgcggcacggaaaccaccgtc
gcggatccggtcgtgacttatggcaagagcgtcagcgcgccgggggcgacagtcgccgtg
ggcgatgtgctggactatacgctgagcgtcaccgtggcgaattcgcccaccacgggcatt
gtcacgctgaccgatactctgggcacggggctggatttcactgccgtcaccgatgcgggt
gtgttcacctgcaatgcggccaatccgctgatctgcacgctggccgccggaacgccggtc
ggcacttacgacatgacctataccgccacggtcaatgacgatgcgacgggcagcgtcacc
aatgccgtggtcggcaccggggatgacgatccgggctgcgacggcacttgcgatacggcg
accaatgtcacgccttcgcaggtcacttatgccaagagcaccagcgcaaccaatgtcagc
gtgggcgataccatcacctatacgctgagtgcgaccgtcaccaattcccagaccaccgat
gacctgacgctgaccgatacgctgggcacggggctggatttcggcagtgtcaccaatgcg
ggcgtgttcacctgcacgccgggcaacccgctgtcctgcacgcttccggcggggactgcc
gtggggacttacagcctggcatatacggccacggtgaatgcggcggccaccggcagcgtg
accaatgccgtgctgggcacgggcggcgatgatccggcctgcctgggcagttgcgatacc
acaaccacggttgatgagccggcagtcgcctatgccaaattcgcggatacggccgggccg
gtcagcgcgggcgatgtcatcaccttcaccctgcgcaccacgatcgccaattccatgacg
acatcggatatcgtgctgctgaccgatactctgggcgcggggctggattttaccgccgtc
accgatgccggggcctatggcgtggatgcttcgggtgcgccggttgtcgaattcaccctg
cctgccggaaccgggccgggcacttatgacgctgtctataccgccacggtcactgccgat
gcatcgggcgcggtcagcaatgccgtggtcggcacgggcggcgatgatgccacatgttcc
ggcgattgcgataccgatacgtccgtcgtcgcgccgggcgtcacctatgccaagacggcc
agcacggccgggccggtcagcgcgggcgatgtcatcacctatacgatcagcaccatcgtg
gcgaattcgcagaccacgggagatgtggtgctggccgatacgctgggcagcgggctggac
ttcaccgccgtcaccgatgcgggcgcctatggcgtggatgcctcgggcgcgccggtggtc
gaattcaccctgcctgcgggcactgcgccgggcacttacgaggtaagctacaccgcgacc
gtgaatggatcggccagcgggtcggtcagcaatgccgttgtcggcaccggggatgacgat
ccgacctgtaccgtcaattgcggcacccaaaccgcggttgaggatccgaccgtcacctat
acgctgagtgcgaccgtcgccaatgcggcgacgaataacgtcctgacgctgaccgatacg
ctcggcacggggctggatttcggcagtgtcaccgatgcgggcgccttcacctgcacgccg
ggcaacccgctggtctgcacgcttccggcggggactgcgccggggacctacagcctgacc
tacaatgcagaggtgaacgccagcgccacgggcagcgtcaacaatgccgtgctgggcaca
ggcggggacgatccggcctgcctgggcgattgcaatatcgacacgccggtaatcgcgcct
gcggtcagctatgccaagacggccagcacggcaggcccggtcagcgtgggcgatgtgatc
agcttcacgctgacgactaccatcgccaattccatgacgacttcggacctggtgctgctg
accgacacgctgggcacgggtctggactttaccgccgtgaccgatgcgggcgcctatggc
gtggatgcgtccggcgcgccggtcgtgcgcttcaccctgcctgcggggacggggccgggc
agctatgccgtcacctacaccgccacggtgaatggatcggccagcggatcggtcagcaat
gtcgtggtcggatcgggcggcgataatccggtctgcacggtgaattgcggcaccgaaacc
acggtcgaagacagcaccgtcacctattccaagagcagcagcgcagcgcaggtgcaggtg
ggcgatagcatcagctacaccctgacggccacggtcgggaattcggcgctgacggatgcc
ctgacgctgaccgatactctcggcaccggactggacttcgtggcgatcaccgatgcaggc
gtgttcacctgcacgccgggcaatccgctggtctgcacgcttccggcggggaccgcgccg
gggacctacagccttgcctataccgccaccgtcaatgcggcggcggggggcagcgtcacc
aatgccgtgctgggcacgggcggggacgatccggcctgcctgggcgattgcatcaccgaa
aacccggtggcggcgccggtcatcagcatcgccaaaacctctgacccggcagcgggcgag
actgtgcaggtggggcagacggtcaattatgcgctggtcgcaaccattgccaatggcgcc
atcacggcaccgctggtgctggtggacacgcccgatccgggcctgaccatcaccgatatt
ccggcgggctgcgaaatggccggggggatcatcacctgcacgcttcccgccgggacgcct
gccggcacgcacagcctggcctatggcgcgacgatcaatgacagcgcgggcgatgccgtg
cgcaatgtggtgacggccacgggcggcggcggaacgactgagccgggctgcaatagctgc
gcgacggagcacaatgtggcgctgcccctgatccgactggccaagacggctgcggtgcgt
gaagtcaggatcggcgatctggtgcgctacacgctttcaatagagaatgtgggcgagcgg
gacctgatcggtggcagcatcatggacatgccgcccgcgggcttcacctatgtcgaaggt
tcgctgcaagtggtggatggcgataatgccgccaccctgtccggccaggggccgctgcgc
tttggcgaaattgacgtgcgggcaggggaaacggcgacgcttgcctatctgatgcgggtt
ggcgcgggtgtccgtccgggcacgcatgtcaaccaggcgcaggcctattcggcggaggat
gtgtccgtttccaatccggccacggcgcgggtggaactggcgggcgatccgctggtggac
gagacattgatcttcggcacattgttcgatgatcgtgacggcgacgggtggcaggacagc
gccgcgctttccggcctgcatgtgcggggcggattcgcgcccggcgcctatgtgcccggt
tccaccatgatcgaccgggggcagggcatggtgcccgtgcccgatgccagcgcgcccttg
ctgcacggcatggatcttggcggcattgccgcgcgccagtccgaagccgatccggcgggc
aggaaccggatcgtgatccgccagcggctgaccgatgcggccttcaccgatgatttcatc
ctcaccagcgcgcagggcgtgaccatccgcatggatgcgcagggccggaccagcgtggaa
aagggcggcgatgcggcaaaggggctgaacggcgcggaaccgcgggtcgaacggcggatc
gcgcagggcgaaggcggccatgtcgtcgattacgtgatcgagaatgacggtatcgacgaa
cgcggcattcccggcgtgcgtatcgcctcggtcgaaggtcttgtcatggagacggaccag
ttcggccgttaccacctggccgccgtgccgggcggagcctgggcgcggggccgcaatttc
atcctgaaggtggatccgtccaccctgcctgacggggccgaattcaccacggataatccg
ctgctgcggcgcattacgccgggcatcccggtccgtttcgactggggcgtgaaactgccc
cccgcgctggtggaagggcggaccgaaacggtggagctggaactggggcaggccatcttc
acccccggcagcgccgaaatccgcgcggaatatctccccgcgattgaccggatggcggcc
gaaatcggcaaatatcagggtggcgagatcgtgatcgaggccaatggcgagaatgcatcg
ctggctttcgaccgcgccgaggccgtaaagaccatcctcctgcgcaaactggatacggcc
tcggcgcggaatctcgccattaccgcgcggggcagggtggatgatccatcctcgctgatt
gccggggtggatgaaggcggcgtgctgctgggcacggtgctgttcgatacggacagcgcg
caaatcaggcccgaattcgcccccctgctgggccgggttgccgcccggctcgcacgggaa
ggcggcggcgcggtggccattatcggccacaccgatctgcgcggttccttccaatataac
accgcgctgggaatgcgccgcgcgcgggcggtttacgaagcgctcgccagccagctccca
cccgacattcgcgcgaaaatccgcgtggacagcagcgaagaccccgcggccccggccgac
gggcaggccgggtga
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