Candidatus Koribacter versatilis: Acid345_3863
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Entry
Acid345_3863 CDS
T00352
Name
(GenBank) Pseudouridine synthase, Rsu
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
aba
Candidatus Koribacter versatilis
Brite
KEGG Orthology (KO) [BR:
aba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aba03009
]
Acid345_3863
Enzymes [BR:
aba01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Acid345_3863
Ribosome biogenesis [BR:
aba03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Acid345_3863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Methyltransf_21
Motif
Other DBs
NCBI-ProteinID:
ABF42863
UniProt:
Q1IJT7
LinkDB
All DBs
Position
4573312..4575354
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AA seq
680 aa
AA seq
DB search
MSSERLQKIIAAAGMASRRKAEELVTAGRVTVNGEVKNELGSKADPETDDIRVDGKPLKA
EQLVYVLLHKPKGYVTTVSDPEGRETVMDLVKGIPARLYPVGRLDYLSEGLLLLTNDGEM
AAKLTHASTHVPKKYLVKVSGEPTEEQIQELRNGVQLPPEQGHIHADPREGGRFGGEKRR
STAVKTAPCKIELTREGDNPWYEVTLNEGRNRQIRRMFDFIGHHVEKIKRVEYGPLKLDV
ENGEFRLLNPAEVARLKKAAEGKHEAPRARDEKPRFAKARGERPAFGRGRSDDRAPFQKG
SYKDRSELESEKGERTRTARFDADGKRMEEAPRERRERPKFDRGARPAFRGKRDDARGER
PAFRGKRDDARGERPAFRGKRDDARSERPAFRARRDDQAGDRPRFPRREEGERPAFRGKR
DDARGERPAFRGKRDDARGERPAFRGKRDDARGERPAFRGKRDDARGERPAFRGKRDDAR
GERPAFRGKRDDARGERPKFARSGERGDRPFRARPAGDGESRGKSFDRPARAGARPNFGD
RPKFGPRKEGGDRPFRGKPGEKKEFRGKREGGSAARGDRKPGGFGRDRREGGERPFRGGD
RPARGDRFGKKPGGPRKDFRPRRDAGVPEREEPRSQEFVDNVAKRFSGGLESGVRGRGKA
PRRGPGGAPKKPFRKPKDRR
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagaacgattgcagaaaattatcgccgccgcaggtatggcgtctcgccgtaaa
gccgaagaactcgtcaccgccgggcgtgtcaccgtgaacggcgaagtcaagaatgagctc
ggctccaaggccgatcccgaaaccgatgacatccgcgtagacggcaagccgctcaaggcc
gagcaacttgtgtacgtgctgctgcacaagcccaagggctacgtcaccaccgtgagcgat
cccgaaggccgcgagaccgtgatggacctcgtcaaaggcattcccgcgcggctttatccc
gtcgggcgcctcgactacctcagcgaaggcctgctgctgctcactaacgacggcgaaatg
gccgctaagctgacgcacgcttccacccacgtgccgaagaagtatctcgtgaaagtcagc
ggcgaacccaccgaagagcagatccaggaactgcgcaatggcgtgcagcttccgccggaa
caagggcacattcacgccgatccgcgcgaaggcggacgtttcggtggcgagaagcgtcgt
tccaccgcggtgaagaccgcgccgtgcaagatcgaactcacccgcgagggcgacaacccg
tggtacgaagtcacgctcaacgagggccgcaaccggcaaatccgccgcatgttcgacttc
atcggacaccacgtggagaagatcaagcgcgtggagtacggcccgctaaaactcgacgtg
gagaacggcgagttccgcttgctgaatcccgcggaagtagcgcggttgaagaaagcggct
gagggcaaacacgaggccccgcgtgcgcgcgacgaaaaaccgcgcttcgctaaagcgcgt
ggcgaacgccccgcgtttggccgcgggcgcagcgatgaccgcgccccgttccagaaaggc
tcgtacaaagaccgttccgagctcgagagcgagaagggtgagcgcacgcgcaccgcacgc
ttcgacgcagatggcaagcgcatggaagaagcaccgcgggaacgtcgcgagcgtccgaag
ttcgaccgcggcgcgcgcccggcattccgtggcaagcgcgacgatgctcgtggcgaacgc
ccagcatttcgcgggaaacgcgatgatgctcgtggggaaagacctgcgtttcgcggtaag
cgcgatgacgcacgtagcgaacgtccggcattccgtgcgcgtcgcgacgaccaggctgga
gatcgcccacggtttccgcggcgtgaggaaggcgaacgtccagcgttccgcggtaaacgt
gacgatgcacgtggcgaacgtccggcattccgaggcaagcgcgacgatgctcgtggtgag
cgtccagcattccgaggcaagcgcgacgatgctcgtggtgagcgtccagcgttccgcggt
aaacgggatgacgcgcgcggcgagcgtccggcattccgcgggaagcgcgatgatgcacgt
ggtgagcggccggcattccgcggtaaacgcgatgacgcacgcggcgagcgcccgaaattc
gcgcgcagcggtgaacgcggcgaccgtcctttccgcgcacgtccggcgggcgatggcgaa
tcgcgcggcaagagcttcgatcgtccggcgcgtgcgggtgcgcgaccgaatttcggcgat
cgtccgaaattcggtccacgcaaagagggcggagaccgtcctttccgtggcaaacccggc
gaaaagaaggaatttcgcggtaagcgtgagggtggttcggccgcgcgcggcgaccgtaaa
cccggcggttttggacgcgatcggcgtgagggcggcgaacggccgttccgcggcggagat
cggccggcgcgtggtgaccgtttcggcaaaaagccgggcggtccgcgcaaggacttccgt
ccgcgtcgcgacgcaggcgtcccggaacgggaggaaccgcggtcacaggaattcgtggat
aacgtcgccaagcgcttctcgggagggctagaatcgggagttcgcggacgtgggaaagct
ccgcggcgtggcccgggcggcgcccccaagaagccgttccgcaagccgaaggataggcga
tga
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