Candidatus Nanopelagicus limnes: B1s21122_03405
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Entry
B1s21122_03405 CDS
T05073
Name
(GenBank) 23S rRNA pseudouridine2605 synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
abam
Candidatus Nanopelagicus limnes
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abam03009
]
B1s21122_03405
Enzymes [BR:
abam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
B1s21122_03405
Ribosome biogenesis [BR:
abam03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
B1s21122_03405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ASY09390
UniProt:
A0A249JXZ7
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All DBs
Position
612782..613516
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AA seq
244 aa
AA seq
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MALTRLNKIIADAGIASRRAADQLILDGRVSVDGETIIELGGKYDPEIHDIKVDGESLKI
NKSKTYLAFHKPTGVISTMSDPEGRANLGDYFADRKDRLYHVGRLDKDSEGVILLTNDGE
LAHRATHPSYGLEKKYLVEIEGEYNKALSDQLLQGVKLEDGLARALKVVHVRAVSKNHHW
VEITIHEGRYHIIRRLIESLGMKVLRLVRLEFGPISLGDMKAGRHRVLNSQELTNLFNLL
NIKL
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggctttaacgcgattaaataaaatcattgcagatgctggtattgccagtcgtcgcgct
gcagatcaattaattcttgatggtcgggtaagtgttgatggtgaaaccataattgagctt
ggtggaaagtatgatccggaaattcatgacattaaagtagatggtgagagtttaaagata
aataagtctaagacttacctagcatttcataaacctacaggagttatttccaccatgtca
gacccagaaggccgcgctaacttgggtgattattttgctgatagaaaagatcgtttgtat
cacgttggcagattagataaagattctgaaggggtaattctgctaactaatgatggggag
ttagcccaccgggccactcatccgtcttatggtttggaaaagaagtatttggttgagatt
gagggggagtacaacaaggctctatcagatcaattgctccagggggtcaaacttgaggat
ggtttagcccgagctttgaaagtggtccacgttagagcggtcagtaaaaatcaccactgg
gtagagatcacaattcatgaaggccgctatcacattattcgtcggttgattgaaagttta
gggatgaaggtattgcgattagtccgattggagttcggtcctatctcactcggagatatg
aaagctggacgacaccgagttctaaattcacaagaattaactaatctatttaacctgtta
aacataaaactctaa
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