Candidatus Nanopelagicus limnes: B1s21122_03550
Help
Entry
B1s21122_03550 CDS
T05073
Name
(GenBank) cysteine desulfurase / selenocysteine lyase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
abam
Candidatus Nanopelagicus limnes
Pathway
abam00450
Selenocompound metabolism
abam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
B1s21122_03550
Enzymes [BR:
abam01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
B1s21122_03550
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
B1s21122_03550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Aminotran_1_2
Beta_elim_lyase
SelA
Motif
Other DBs
NCBI-ProteinID:
ASY09414
UniProt:
A0A249JY11
LinkDB
All DBs
Position
581784..583031
Genome browser
AA seq
415 aa
AA seq
DB search
MTVDLSKYQGDFPILSRKVRGGNRFIYLDSGATSQKPESVITAEADFYRTKNAAVHRGAH
LVAEEASDAYEGARANLAKFIGAQTDEIIFTKSATESLNFLAYSFGNKNSRICLKAGDEI
VVSEMEHHANLIPWQQLAERIGAKLTWLPITNDGRLDLSKISQVITGKTKIVAITHQSNV
FGTIVPIDQIVKAARSVGAFIILDACQSVPHFPVDVKKLDVDFLAFSGHKMLGPTGIGIL
WGKSELLEQLEPALFGGSMVDSVTMETATWAKAPRKFEAGVPNMAQAVGLSAAVDYLNNV
GMANVESHELALTKELLEGLSQITAVNVIGPLDMKDRGGVVSFTIDGVHPHDVGQVLDQY
GIAVRTGHHCAWPLMRKLNLVGTTRASFHLYNDSKDVQALLQGVIKTKEYFKVGK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgacagtagatctaagtaaataccaaggcgattttccgatactgtcccgaaaagttcgg
ggtggtaatcgctttatttatttagacagtggcgctacctcccaaaaacctgaatccgtt
attactgccgaagctgatttctatcgaacgaaaaatgccgcagtccaccgcggtgcccat
cttgttgctgaagaagcatcggatgcatatgaaggagctcgggctaatttagcgaaattt
attggcgcgcaaacagatgaaattatttttactaaaagtgctacagaatccttaaatttt
ttggcatactcttttggaaacaaaaactctagaatatgtctaaaggctggcgatgaaatc
gttgtttctgagatggaacaccacgcaaatttaattccgtggcaacaattagctgaacgg
attggcgcgaaattaacctggctgccaataaccaatgatggtcgattagacctttcaaag
atatcccaagtaattacgggcaagaccaagattgttgctataactcatcaatcaaatgtg
tttggaacaattgtgccaatcgatcaaattgttaaggcggctagatcggtgggggctttc
ataattttggacgcttgccagtctgttcctcatttcccggttgatgttaaaaaactagat
gtagattttctagcattctcaggacacaaaatgttaggtccaactggcatcggaattctg
tggggtaaatctgaactactggaacaactagagccagccctttttggtggatcaatggtt
gactcagtaactatggaaactgccacttgggcaaaggcacctagaaaatttgaagccggc
gttcctaatatggctcaagcagttggtttatctgccgctgttgactatttaaacaatgtt
ggaatggcgaacgtggaaagtcatgaacttgcgttaacgaaagagctgcttgagggttta
tcgcaaattacagcagttaatgtcattggtccgttagatatgaaagatcgcggaggagtg
gtttcatttacaattgatggtgttcatccccatgacgtggggcaagttttagatcagtat
ggaatagccgtgcgaactgggcatcactgcgcatggccattgatgcgaaaattgaattta
gttggaacaactagagcttctttccacttatataacgattcaaaggatgtgcaagcactg
cttcagggagtaattaaaactaaagagtatttcaaggttggtaagtaa
DBGET
integrated database retrieval system
