Candidatus Nanopelagicus limnes: B1s21122_03730
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Entry
B1s21122_03730 CDS
T05073
Symbol
trpB
Name
(GenBank) tryptophan synthase beta chain
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
abam
Candidatus Nanopelagicus limnes
Pathway
abam00260
Glycine, serine and threonine metabolism
abam00400
Phenylalanine, tyrosine and tryptophan biosynthesis
abam01100
Metabolic pathways
abam01110
Biosynthesis of secondary metabolites
abam01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
B1s21122_03730 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
B1s21122_03730 (trpB)
Enzymes [BR:
abam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
B1s21122_03730 (trpB)
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GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
ASY09446
UniProt:
A0A249JY57
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Position
539187..540401
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AA seq
404 aa
AA seq
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MSAGKKVDDLTSSVLGHFGPYGGRFVPEALIAALDELSAAHTSALSDPKFQSELSELHKT
YSGRPSILTDAKRFSEHAGGARILLKREDLNHTGSHKINNVLGQALLTKRMGKKRIIAET
GAGQHGVASATAAALFGLECVVYMGEADTKRQALNVARMKLLGATVVPVTQGSKTLKDAI
NEAMRDWVTNVSTTHYLLGTVAGPHPFPTMVRDFQRIIGVEARQQVLDLTGKLPDAVLAC
VGGGSNAIGIFHPFIEDSSVRLIGLEAGGKGIETGMHASTISGGKPGVLHGTRSYVLQDS
DGQTIESHSISAGLDYPGVGPEHAYLNDIGRAEYRSITDDQAMYAFSLLCKSEGIIPAIE
TAHALAGALEIGNELGKDATLLINLSGRGDKDVQTAAEYFGLPL
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaggcaaaaaagtggatgacttaacttcttccgtacttggacattttggaccc
tatggaggtcgttttgttccagaggctttaattgccgcactagatgaattatcagcagcg
cacacatcagccctttctgatccaaaatttcaaagtgaattatccgaacttcacaagact
tatagtggtcgcccaagtattttgactgatgcaaaaagattttcagaacatgcaggtggt
gcaagaattcttttaaagcgagaagatttaaatcacactggcagtcacaaaattaacaat
gttcttggtcaagcactacttacaaagcgaatgggcaagaagagaatcattgctgaaact
ggggcaggccagcatggtgttgcctcggcaacagctgcggcattgtttggtttggagtgt
gtggtctatatgggcgaggctgacacaaagcgacaagctctaaatgttgcacgaatgaaa
ttattaggcgccaccgtagtaccggtaacccaaggatcaaaaactttaaaggatgcaatt
aatgaagcaatgcgtgattgggtaacaaatgtttccacaactcattatttgcttggcacc
gtggccggacctcatccattcccaacgatggtcagagattttcaaagaattatcggagtt
gaagctaggcaacaagttctagatttaactggcaagttaccggatgcagttttagcttgt
gttggcggtggatcaaatgcgattggaatcttccacccatttatagaggattcatctgtt
cgcttaattggcttagaggccggtggtaaaggtatagaaactggaatgcatgcctcaact
atttctggtggcaaaccaggtgttttgcatggaacccggtcatatgttttacaagattca
gatgggcaaactattgagtcacattcaatatctgctggtttagattatccaggagttgga
cctgaacatgcttatctaaatgatattggccgcgctgaatatagatccattacagatgat
caggctatgtatgcgttctcattactttgtaaatcagaaggaataatcccagcaattgaa
actgcacatgccttggcgggagctttagaaattggaaatgaattgggcaaggatgcaact
ttgttgataaatctttctgggcgcggggataaagatgtgcaaactgcggctgagtacttt
ggtttaccgctctaa
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