KEGG   Trichophyton benhamiae: ARB_00299
Entry
ARB_00299         CDS       T01611                                 
Name
(RefSeq) hypothetical protein
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
abe  Trichophyton benhamiae
Pathway
abe03082  ATP-dependent chromatin remodeling
abe03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:abe00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    ARB_00299
   03083 Polycomb repressive complex
    ARB_00299
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:abe03036]
    ARB_00299
Enzymes [BR:abe01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     ARB_00299
Chromosome and associated proteins [BR:abe03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     ARB_00299
   HDAC complexes
    Sin3A-HDAC complex
     ARB_00299
    BRAF-HDAC complex
     ARB_00299
    REST complex
     ARB_00299
    SHIP complex
     ARB_00299
    MiDAC complex
     ARB_00299
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     ARB_00299
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    ARB_00299
  Chromatin remodeling factors
   NuRD complex
    ARB_00299
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 9519517
NCBI-ProteinID: XP_003013481
UniProt: D4AVT5
LinkDB
AA seq 675 aa
MTGFAPLDAPVTNGSTDKKRIAYFYDSDVGNYAYVAGHPMKPHRIRMTHSLVMNYGLYKK
MEIYRAKPASKFEMTQFHTDEYIDFLAKVTPDNMDQYAKEQSRYNVGDDCPVFDGLFEFC
GISAGGSMEGAARLNRNKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRV
LYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDIGVGAGKYYSVNFPLRD
GIDDVSYKGIFEPVIKHVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVKS
FNLPTLILGGGGYTMRNVARTWAYETGVLVGNQLPTELPYNDYYEVSFSDYPTLYAGCVL
TVFQYFSPDYELDVRPSNMDNANSKEYLEKIRMQVVENLRRTTFAPSVQMTDVPRDPLVD
GMDDEADAILDDLDEDENKDKRYTKRRFDNYVEKDGELSESEDEESAAANGVRRQPNRER
RRGNINYRHLDGDSIIDSGIVTPRDESSMPEEEPEQADKMDETENAEPPAKPSPAVEPLT
KPDSQMEDDETPVAETNGAAQEVEEKEPPVSTPASNLAVPHDNADGDTTMEDADVNMDET
IELEPPAEEQEEESAAKAPARETTPPKPPAAEETKSNASGAENTAAEPTQVTDTTEAKET
KLDTDESKEVPKEKE
NT seq 2028 nt   +upstreamnt  +downstreamnt
atgacggggtttgcaccgctagatgctcccgttacgaatgggtccacggataagaagcgc
attgcctacttctatgactcggatgtgggcaattatgcctacgtcgctgggcaccccatg
aagcctcatcgcattcggatgacccacagcttggtgatgaactatggactttataaaaag
atggagatatatcgcgcaaaacccgccagcaaatttgagatgacgcagtttcataccgat
gaatacatagatttccttgccaaagttacacccgataatatggaccagtacgcgaaggaa
cagagccgttataatgttggtgatgactgccctgtgtttgacggtctttttgagttctgt
ggaatcagcgcaggaggctccatggaaggtgctgcgcgcctcaacagaaataaatgcgac
attgcagtcaactgggcgggtggtcttcatcacgcaaagaaaagtgaagcaagcggcttt
tgttacgttaacgacattgttctcggcattctcgagcttctgcgtttcaaacagcgtgtt
ctttatattgatattgatgtccaccatggggatggtgtcgaggaagcattctatactacc
gaccgtgttatgacggtctcattccataaatatggagaatacttccccggaaccggcgaa
ctgcgcgacatcggtgtcggtgcagggaagtattattctgtcaacttccctctcagagat
ggcatagatgacgtttcttataaaggcatctttgaaccggttatcaaacatgttatggaa
tggtaccgcccagaggctgtcgtccttcagtgcggtggtgatagtttgtctggtgaccgt
ctgggatgtttcaacttgagtatgcgtggtcatgcaaactgcgttaaatacgtcaaaagc
ttcaacctccctacattaatcctggggggtggaggttacacaatgagaaacgttgctcga
acgtgggcatatgaaactggtgtgcttgttggaaatcagcttccaacagagcttccatat
aacgactattatgaagtaagtttttcagattatccaacactctatgcaggctgtgtgctt
acggtatttcagtacttttctcctgactatgaattggatgttcggccatcgaacatggat
aatgccaactccaaggagtacctggaaaagattcgaatgcaagttgttgaaaatctacgg
cgcactacgtttgctccatcagtccaaatgacagatgtcccgagggacccattagttgat
ggtatggatgacgaagcggatgctatcctcgatgaccttgatgaagatgagaataaggat
aagagatatacaaaacgacgatttgacaactacgtcgaaaaagatggcgaactaagcgag
agtgaagatgaagaatctgcagctgcaaacggtgtccgtcgccaacccaatagagaaagg
aggcgagggaatatcaattaccgtcacctggatggggactccattatagacagtgggatt
gttactcctcgagacgagtcatccatgccggaggaggagcctgagcaggctgataagatg
gacgaaacagaaaatgcagaacctcctgccaagccctctcctgccgttgaacctttaacc
aagccagattcacaaatggaggatgatgagactccggtcgccgaaaccaacggtgccgct
caagaggtcgaggagaaagagcctcccgtttccacacctgcctcgaacttagcagttcct
catgacaatgctgacggggacaccaccatggaagacgcagatgttaatatggacgaaact
atcgagctagaacctccagctgaggaacaagaggaagaatctgctgcaaaggctcctgca
cgggagacgacacccccaaaaccgccagcggcggaagaaaccaagtcgaatgcttctggg
gcagaaaacactgctgcagagcctacgcaggtaactgataccacggaagccaaggaaaca
aagcttgatactgatgagtctaaggaggttccaaaagagaaagagtaa

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