Trichophyton benhamiae: ARB_00469
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Entry
ARB_00469 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
abe
Trichophyton benhamiae
Pathway
abe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ARB_00469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abe03041
]
ARB_00469
Enzymes [BR:
abe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ARB_00469
Spliceosome [BR:
abe03041
]
Complex A
U2 snRNP components
U2 related factors
ARB_00469
Complex B
ARB_00469
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
9519238
NCBI-ProteinID:
XP_003013284
UniProt:
D4AWA4
LinkDB
All DBs
AA seq
1181 aa
AA seq
DB search
MARDTRSPSPVGSTYSSSKRSRRGDDNYDKSRRHDVKGDAIVTEAGTGIETFTDIEIALL
ILETLVTIPPIAPEEAVRDLDTVLVREKIVVATDIEAGAGIEPTVADEMILAIGVVDEGM
APLTPDVLLDGMGVSKQASTASPAQTDEQKKAERLAKLEAWKQKQAAERERKQNELAASG
PRGILDEIDKKVALSRGVSTPTTSTQPTASSHSAGTARVTDTTSSPTPEQLKKTTVASGS
TKVSEASNLSSASAVANKSSVGASSSSAAAPLKTSGNVSGFGLGTKNLSDSNKLSVKRTL
NFGEEESKGTKLLKLPDSSLEEFSANTTPQDGDDDDDDDTVMQDGGTEEENAAAARAAAE
RREQNRVQPEAPSDENKLEEPQPKEPSNDVAMTDSAAEPEAEEEIDPLDAFMSDLKQSTS
TPKQSAKPSSSKLQQPEAMFGDENDINMDPVEPEADDFFALANKSKRKKDIPTVNHSKIN
YEPFRKNFYTEPVDLAGLTEAEVANIRLELDGIKVRGVDVPTPVQKWSQCGLGVQTLDVI
RKLGYEGPTSIQSQAVPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQRPLENMEGPI
SLIMTPTRELATQIHRECRPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMI
DLLTANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILGNIRPNRQTVLFSATFPRNM
EALARKTLSKPIEIIVGGRSVVAPEITQIVEVRNDDAKFVRLLELLGNLYSDDENEDART
LVFVDRQEAADRLLRDLMRKGYPCMSIHGGKDQIDRDSTIDDFKAGIFPILIATSVAARG
LDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDISKALKQSG
QPVPEPIQKMVNAFLDKVKEGKEKASGSGFGGKGLERLDQERDATRNRERKTYKTGEEGE
DEDKEEDKKEKEADLFSRAASAVQSSTATPALGTPGGVDLDGKITVHRTQKDTSSSAGKN
TLDKVGSAVADIHARLNKAGVMRSGVPIDNKGPDAGAFHATLEINDFPRKFFHFPIKLLV
PISEGITNYIIEKARWAVTNRTNVAKILEATGTSITTKGSFYPAGKEPQPGENPKLYILV
EGDTELVVTNAMRELMRLLKEGTIAAADSDARAPSGRYNVV
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggccagggatactcgctcaccatcacctgtaggcagcacgtattcttcgtcgaaacga
agccggagaggcgatgataactacgacaagagcagacgccatgatgtgaagggagacgcc
atcgtgacagaggccgggaccgggatagagacctttaccgacatagagatcgctctgttg
atactcgagactctcgtgacaatacctcctatcgccccagaagaagccgttcgcgaccta
gataccgttctcgttcgcgagaagatagtcgtggctaccgatatcgaagcaggagcaggg
atagagcctaccgtagcagacgagatgattctcgcgatcggggtggtagacgaagggatg
gctccgctgactccagacgtgcttctcgacgggatgggagtttccaagcaggcatctact
gcatcccctgcccaaactgatgaacaaaagaaggctgaaagactagcaaagttggaggca
tggaagcagaaacaggcagcagaacgtgaacgaaaacaaaatgagcttgccgcaagtgga
ccaagaggtattctcgatgaaattgacaagaaagttgctttatcgcgcggtgtatccacg
cctaccacttcgacacaaccgaccgctagctcacactctgctggaacagcaagagttacg
gatacaacatcgtcccccactcccgagcaactgaagaaaacaaccgtggcttctggtagt
actaaagtgtccgaagcctctaatctttcatctgcaagtgctgtggctaacaaatcttca
gttggtgccagctcttcgtccgctgctgcaccgcttaaaacatcaggcaatgtcagcgga
tttggcctagggaccaaaaatcttagcgattcaaacaaactaagcgtaaagaggacgctc
aattttggagaggaggaatccaagggcacaaaacttttaaaactccctgactcgtcccta
gaggagttttctgccaataccaccccgcaagacggtgatgacgatgacgatgatgacact
gttatgcaagatggtggtaccgaagaggagaatgccgctgctgcaagagccgctgcagaa
cgacgtgaacagaatcgcgtacaacctgaagcaccatccgacgaaaacaaacttgaggag
ccccaacccaaggagccttccaatgatgtcgccatgaccgacagtgcggctgaaccagag
gcagaggaagaaattgatccgcttgatgctttcatgtcggacttaaaacaaagcacatct
acaccgaagcaaagtgccaaaccctctagctcgaagcttcaacaacctgaagcaatgttt
ggagacgaaaatgacattaacatggacccagttgaaccagaagcagacgattttttcgcg
ttagctaacaaatcaaaacgtaaaaaagatatacccacagtcaaccattcaaaaataaac
tacgagccgtttcgaaagaatttctacaccgagcctgttgatcttgctggtctaaccgaa
gcagaggttgccaatatacgcctagagctggatgggataaaagtccgaggcgtcgacgtc
ccgacgcccgttcaaaaatggtctcaatgtggtctaggtgtccaaacactagatgttata
cgcaagctcggctatgaaggaccaacttcaattcagtctcaggcagttccagcaattatg
tccggccgggatgtaataggagtagcaaaaacaggctccgggaagaccattgcttttctt
ctccctatgttccggcatatcagagaccagcggccattagagaacatggaaggcccaata
agccttatcatgaccccaactcgagagcttgccacccagattcatcgggaatgcaggcct
tttttgaaggccttgaaccttcgggctgtctgtgcatacggaggagcgccgataaaggac
caaattgcggaattaaaacggggcgcggaaattatagtctgtactccgggcagaatgatt
gatttgcttactgcaaactcggggagggttacaaacttgcgcagagtgacgtatgtggtc
cttgacgaagctgatcgtatgtttgacatgggatttgagcctcaagtgatgaaaatcctt
ggtaacattcggcccaatcgtcaaactgttttgttctccgccactttccctcgaaacatg
gaagcgttggcccgaaagaccctgtcaaagcctattgagattatagttggcggaagaagc
gttgttgccccggagatcacccaaatcgtcgaagtgcggaacgatgacgccaaatttgtt
cgtctcctagaattactgggaaatctttactctgacgatgaaaatgaagacgcccgaacg
ctggtgtttgttgataggcaagaagcagcggatcgcttgctacgggatttaatgcgcaag
ggctatccctgcatgtcgatccacggtggaaaggatcagattgaccgcgattcaactatc
gatgactttaaggcgggcatattcccaattctgattgccacgtcagtagcagcacgagga
cttgatgtaaagcagctcaagcttgtcgtgaattacgatgctccaaaccatcttgaggac
tatgttcaccgggcgggtcgcaccggacgggcaggtaacactggtacggcagttacattc
ctaactgaagatcaggaacggtattcggttgatatctcaaaagccctcaagcaaagtggt
caaccagttcctgagccaattcagaaaatggttaatgcattcctggataaagtaaaggaa
ggcaaagagaaagcgagtggatccggatttggaggtaaaggactggagagactcgaccaa
gaacgtgacgctactcgtaaccgagagcgaaagacgtataaaactggagaagagggtgaa
gatgaagataaggaggaagacaagaaagaaaaggaggctgacctgttcagcagagctgcc
tcggccgtccagtcttccaccgcaactccagctttgggcacacctggaggtgtggacctg
gacgggaaaatcaccgtccataggacacaaaaagatacaagctcgtctgccggcaaaaac
acccttgataaagtaggctctgctgtcgcagacatccatgctcgccttaacaaggctggt
gtcatgagatccggtgtgccgattgataacaaaggccctgatgctggagctttccatgct
accctcgagattaatgacttcccacgtaagttttttcatttccccataaaattacttgta
ccgataagtgaagggataactaactatattatagagaaagcccgatgggctgttaccaac
cggaccaatgttgccaaaatactggaagcaactgggacttcgatcacgaccaagggcagc
ttctacccagcaggaaaggaaccccaaccgggagagaatccgaaactgtacattcttgtc
gagggtgatacagagctggtagttaccaacgccatgcgtgagctaatgcggctattaaaa
gagggaactattgccgcagctgatagtgatgccagggcgccgtctggccgctacaatgtg
gtataa
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integrated database retrieval system
