Alcanivorax borkumensis: ABO_1485
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Entry
ABO_1485 CDS
T00380
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
abo
Alcanivorax borkumensis
Pathway
abo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABO_1485 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abo03400
]
ABO_1485 (xthA)
Enzymes [BR:
abo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ABO_1485 (xthA)
DNA repair and recombination proteins [BR:
abo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ABO_1485 (xthA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
CAL16933
UniProt:
Q0VPG5
LinkDB
All DBs
Position
1693134..1693949
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AA seq
271 aa
AA seq
DB search
MTLISFNINGIRARLHQLQAVIDKYQPALIGLQETKVHDPDFPEQAVRDMGYHPYYFGQK
GHYGVALITREPLESVQYGFPTDDEDAQRRMIIGTLKHNDGSLITVLNGYFPQGENRDHP
LKFPAKKKFYEDLQHYLITHHQPSDQVAVMGDFNISSTDLDIGIGEPNRKRWLREGKTSF
LPEEREWWDRLVGWGLTDTFRHQNPTTDDVFSWFDYRSKGFDREPRRGLRIDTVLATEPL
MAKLDTTGVDYQMRAMEKPSDHCPVWARFNG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgatttcattcaacatcaatggtattcgtgcccgtctacatcagctccaggcg
gtgatcgacaaataccaacccgcattaatcggcttgcaggaaaccaaggttcacgacccg
gattttccagagcaggcggttcgagatatgggctaccatccctattattttggccagaaa
ggccactatggcgtggccctgattacccgcgaacctctggaatcagtgcagtatggtttc
cccaccgacgacgaagacgcgcagcggcgcatgattatcggcacactgaaacataatgat
ggtagcctaatcacagtactcaacggctacttccctcaaggggaaaaccgcgaccacccg
ttaaagtttcctgccaagaaaaaattctacgaagatctgcagcattacctgatcacccac
catcagcccagcgatcaagtggcggtaatgggggacttcaatatttcatctacagatctg
gatatcggcattggcgagccgaaccgcaagcgctggctgcgcgaaggcaaaaccagcttc
ctgcctgaagaaagggaatggtgggaccgcctagtaggctggggcctgactgacaccttc
cgacaccagaatcccaccaccgacgacgtgttctcctggtttgactatcgctccaagggc
tttgatcgtgagccacgccgaggcctgcgcattgataccgtattggctactgaaccactg
atggccaagctggacaccaccggtgtggattatcagatgcgcgcaatggaaaagccctcg
gatcattgtccggtctgggcacgttttaacggctga
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