Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT121627
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Entry
AGABI1DRAFT121627 CDS
T03136
Symbol
AGABI1DRAFT_121627
Name
(RefSeq) hypothetical protein
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AGABI1DRAFT121627 (AGABI1DRAFT_121627)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abp03041
]
AGABI1DRAFT121627 (AGABI1DRAFT_121627)
03400 DNA repair and recombination proteins [BR:
abp03400
]
AGABI1DRAFT121627 (AGABI1DRAFT_121627)
Spliceosome [BR:
abp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
AGABI1DRAFT121627 (AGABI1DRAFT_121627)
DNA repair and recombination proteins [BR:
abp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
AGABI1DRAFT121627 (AGABI1DRAFT_121627)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_C
SAP
Motif
Other DBs
NCBI-GeneID:
18825801
NCBI-ProteinID:
XP_007331324
JGI:
Agabi_varbur_1_121627
UniProt:
K5VTZ8
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MPPYDDWNKIDEEDEEEVQDTSFFEGKKDVILFCIDCSESMLELREDSNREGIKTCHLFT
ALEAAMQIQKRKIIVGPNDSVGILVYNTTFKSGNGRSSISELKQNTTVYQPVSQLSAPKI
QELIHLLDAAREDPEELRKAFPPVTGKLVAMGDVFTSCNWVLRDQAPKTATKRIFLITDE
DDPHSGPGSKQLITSARTTLEDLIQAGVSVEPFFINTEDKPFDVSKFYSQILLPTNLDAE
EQLGEDPSLLPESISISRVEDLLSQMRIHEAPKRSLFNIPFQLAEGFVIGVQGYGLVTEQ
KKGNYKYFADLGDRMEVAIPRTAYVDEDRQADIEKAKIVYGVGQGKGDEEEEDDSLGVGI
KTAKRGQRPFYSAEEIRSFRTLGLEPGIKLLGFKDRDELRFEDNIKHSHFIYPNEMSYSG
SRRTFSALLKSMIRKNKVGLALVLMRRNSSPVFSVLLPQEEQTDENGFTEPPGMHLIHLP
FADDIRAAPIEDAFRASDQLKDAARAWIDKLSVKNGTYPPDSYPNPALSYHNAQLQASAF
REEFDVEAFEDMTEPNFEKIHKRAGNLMKEWKLALLNDKTANIGVATAGSKRKADVATND
VDEAEFRSKYQAGTLGKLKVGQLKTFLSAKGQPVSGRKDELLARVATWFDSH
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgccgccttacgatgactggaataagatcgatgaggaggatgaggaagaagttcaagat
acatctttctttgaagggaaaaaagacgtgattttgttctgtattgactgctctgaatct
atgcttgaactacgtgaagactcgaatcgtgagggcatcaagacttgtcacctttttact
gcgttagaggctgccatgcaaatccagaaacggaagattattgtcggaccgaatgactcg
gttggaatcttggtttacaacacaacgttcaagtcagggaatggacgcagcagcatatcg
gagctgaagcaaaacaccaccgtttaccaacctgtctctcaactaagtgcacccaaaatc
caggaattgatacatctgttggatgccgcgcgtgaagaccctgaggagctccgaaaggca
ttcccacctgtaactgggaaactggtcgccatgggagatgtgttcacgagctgtaattgg
gttttacgtgaccaggcacccaagacagcaaccaagcgtattttcctcatcacggatgaa
gatgatcctcattcaggtcctggcagcaagcaattgatcacgtcggcacgaacaacatta
gaggacctgattcaagctggcgtctcggtcgaacccttcttcatcaacactgaggataag
ccttttgatgtgtccaaattctattcccaaattctgttacctacgaatttggacgcggaa
gagcaattgggcgaagatccttcgcttcttcctgaatctatctctatatcccgggttgag
gacctgctaagccagatgcgaattcatgaagctccgaaaagatccctttttaacatccca
ttccaacttgccgagggattcgtcattggtgtccaaggatatggcttggtcactgaacaa
aaaaaaggtaattacaagtattttgccgacttaggcgatcgaatggaggttgctattcca
cgtacagcatatgtggatgaggaccgtcaagctgacatagaaaaagcgaagattgtttac
ggcgtgggtcaaggaaagggcgacgaagaagaggaagatgatagtctaggtgttggtatc
aagacagctaagcgaggtcaacgaccattttatagtgcagaagaaattcgttctttccgg
acgttgggtcttgagcccggaataaaacttttaggattcaaggacagagatgagcttcgg
tttgaagacaacatcaagcactcgcactttatttacccaaatgagatgtcatactctggt
agcagaaggacattcagtgcgctgttgaagtctatgattcggaagaacaaagtaggattg
gcacttgtcctgatgcgacggaacagttcccccgtattttctgtcctcctcccacaggaa
gagcaaaccgacgagaatggctttaccgaaccacccggcatgcacctgattcacttacct
ttcgctgacgacattcgtgctgctcccatcgaagatgctttcagagcatccgaccaattg
aaagatgcggcccgtgcttggatcgataagctaagcgttaagaacggaacatatccgccc
gattcgtacccaaatcctgcgctttcttaccacaatgcacaactccaagccagtgcattt
agagaggagtttgatgtcgaagcttttgaagatatgaccgaaccaaactttgaaaagatc
cataagcgagcaggaaacttaatgaaggagtggaagttggccttacttaacgataaaacc
gcaaatattggtgtcgctactgcgggttccaagcgcaaggcggatgtcgccaccaatgat
gtagacgaggccgaattccgcagcaagtaccaggccggaaccctcgggaagctgaaagta
ggtcaactcaaaacttttttgagtgcgaaaggccagcctgtttccggaaggaaggacgaa
ttgctggcccgggtcgcaacttggttcgactctcattaa
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integrated database retrieval system
